Gene Mflv_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5019 
Symbol 
ID4976330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5343773 
End bp5344288 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content70% 
IMG OID640459246 
ProductRNA polymerase sigma factor SigL 
Protein accessionYP_001136273 
Protein GI145225595 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.424714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGATG CGGACGCCGC GATGATGCGG GTGCTCTACG ACGAGCACGC CGCCGCGCTC 
TGGCGTTACG CGCTGCGCCT CACCGGCGAC CGGGCCCGCT CGGAGGACGT CGTGCAGGAG
ACACTGCTGC GGGCCTGGCG TCATCCGGGC GTCATCGCCG ACGTGGACCG GCCCGCGAGG
GCGTGGCTGT TCACCGTCGC CCGCAACATG ATCATCGACG AACGGCGCAG CGCCCGCTTC
CGGCACGAGA CCGGTGTCCC CGATCCCGAG CACGTCGCCG AGCCGGCCTC ACCGGACGAG
GCGGACCCCA CTCTGGACCG GATCCTGCTG GGCACCGCGT TGCGTCAACT GTCCGACGAA
CACCGCGCCG TGGTGCGCCG GGCCTACTAC CAGGGCTGGA CCACCGGGCA GATCGCCGCC
GATCTGCAGA TCCCGGAGGG CACCGTGAAA TCCCGGCTGC ACTACGCCGT GCGCGCATTG
AAGCTCGGAC TACAGGAAAT GGGGGTGACT CGATGA
 
Protein sequence
MEDADAAMMR VLYDEHAAAL WRYALRLTGD RARSEDVVQE TLLRAWRHPG VIADVDRPAR 
AWLFTVARNM IIDERRSARF RHETGVPDPE HVAEPASPDE ADPTLDRILL GTALRQLSDE
HRAVVRRAYY QGWTTGQIAA DLQIPEGTVK SRLHYAVRAL KLGLQEMGVT R