Gene Mflv_4893 details

Gene Information

• Locus tag: Mflv_4893
• Symbol: dnaE2
• ID: 4976204
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium gilvum PYR-GCK
• Kingdom: Bacteria
• Replicon accession: NC_009338
• Strand: -
• Start bp: 5212620
• End bp: 5215883
• Gene Length: 3264 bp
• Protein Length: 1087 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640459120
• Product: error-prone DNA polymerase
• Protein accession: YP_001136147
• Protein GI: 145225469
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.0740584
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTCGCG TCCTCGAAGG CAAGCCCCGT CGCGCCGGTT GGCCCATCGA CGCACAGGTC 
GGCGACGGCG GGGACAGTCC AGCCTGGTCG AGCAAGCGGG GGCAGTACCG GGCGCCGGAG 
TCGAGGGGCC CCGCGACGGG GCGTTCGATG CCCTACGCCG AGCTACACGC CCACTCGGCC 
TACAGCTTTC TCGATGGTGC GAGCACTCCC GAGGAACTGG TGGAGGAGGC GTCCCGGCTG 
GGCCTGCGGG CCCTCGCGCT GACCGACCAC GACGGGCTCT ACGGTGTGGT GCGCTTCGCC 
GAAGCGGCCA AGGAGCTCGA CGTGGACACG GTCTTCGGTG CAGAACTGTC CCTCGGTGGG 
GGAACCCGCA CCGACGTCCC CGACCCGCCC GGCCCGCACC TGCTGGTGCT CGCCCGCGGG 
CCGGAGGGCT ACCGGCGACT GTCGCGGCAG CTGGCTGCGG CGCATCTGGC CGGTGGCGAG 
AAAGGGGTGC TGCGCTATGA CTTCGACGCG TTGACGGAGG CCGCGGGCGG GCACTGGCAG 
ATCCTCACCG GATGTCGCAA GGGTCATGTC CGCCAGGCGC TGTTGCGTGG AGGCGACAGT 
GCTGCCGAGG CCGCGCTGGC CGATCTGGTG GATCGGTTCG GCCGCGAGCG GGTCACTGTC 
GAGCTCACCC ACCACGGCCA TCCGCTCGAC GACGAACGCA ATGCCGCACT GGCCGCGCTG 
GCGCCGCGGT TCGGCCTCAC CGTCATCGCC ACCACCGCCG CGCATTTCGC CGAACCGTCC 
CGGGGCAGGC TCGCGATGGC GATGGGGGCG ATCCGGGCCC GGAACTCGAT CGACGAAGCA 
GCGGGTTACC TTGCCCCGCT CGGCGGGTCG CATCTGCGGT CGGGGGAGGA GATGGCACGG 
GTGTTCGCCC ACTGCCCCGA GGTGGTGACG GCCGCCGCCG ATCTCGGTGA ACAGTGCGCG 
TTCGGCCTTG CGCTGATCGC TCCACAGCTG CCGCCGTTCG AGGTCCCGGC GGGGCACACC 
GAGAACAGCT GGTTACGGCA CCTGGTGATG CAGGGCGCCC GCGAACGCTA CGGCCCGCCC 
GAGCGCGCGT CGCGCGCCTA CGCCCAGATC GAGCACGAGC TGCGGGTCAT CGAGCAATTG 
AATTTTCCGG GTTATTTCCT TGTGGTGCAC GACATCACCC GGTTCTGCCG GGAGAACGCG 
ATCCTGTCCC AGGGTCGGGG GTCGGCGGCC AACTCGGCGG TCTGCTACGC CCTCAAGGTC 
ACCAACGTCG ACCCGATCGC CAACGGGTTG TTGTTCGAAC GCTTCCTGTC CCCGGCCCGC 
GACGGGCCAC CCGACATCGA CATCGACATC GAATCCGACC TGCGCGAGAA GGCGATCCAG 
TACGTCTACG AACGCTATGG GCGCGAGTAC GCCGCCCAGG TGGCCAACGT GATCACCTAC 
CGGGGACGCA GCGCGGTGCG CGACATGGCC CGCGCGCTGG GATTCTCGCA GGGGCAGCAG 
GATGCCTGGA GCAAGCAGAT CAGCCAGTGG GGCAACCTGG CCGACGCCAC CCATGTCGAG 
GACATCCCGG AGCCCGTGAT CGACCTGGCC ATGCAGATCT CCCACCTGCC CCGGCACATG 
GGAATCCACT CCGGCGGCAT GGTGATCTGC GACCGCCCGA TCGCCGACGT GTGTCCGGTC 
GAGTGGGCGC GGATGGAGAA CCGCAGCGTC CTGCAGTGGG ACAAAGACGA CTGTGCCGCA 
ATCGGTTTGG TCAAGTTCGA TCTGCTGGGG CTCGGTATGC TCTCGGCACT GCACTACGCG 
ATCGACCTGG TGGCCGAGCA CAAAGGCCTT GAGGTGGACC TGGCCAAGCT CGACCTCTCG 
GAACCGGCGG TGTACGAGAT GCTGCAGCGG GCCGACTCCG TCGGGGTGTT CCAGGTGGAA 
TCCCGGGCGC AGATGGCGAC CCTGCCCCGG CTCAAGCCCC GGATGTTCTA CGACCTGGTG 
GTCGAGGTCG CGCTGATCCG GCCCGGCCCC ATCCAGGGTG GCTCGGTGCA TCCCTACATC 
AAGCGGCGCA ACGGTCAGGA GCCGGTCACC TACGAGCATC CCTCGATGGA GCGGGCACTG 
CGAAAAACGT TGGGGGTGCC GCTGTTCCAG GAGCAGTTGA TGCAGCTGGC GGTCGACTGC 
GCGGGCTTCT CGGCGGCCGA GGCCGACCAG CTGCGCAGGG CGATGGGCTC CAAGCGCTCG 
ACGGAGAAGA TGCGCCGGCT GCGCGGACGG TTCTTCGAGG GCATGGCCGA ACTGCACGGC 
ATCAGCGGAG ACGTCGCGCG CAGGATCTAC GAGAAGCTGG AGGCCTTCGC GAATTTCGGC 
TTCCCCGAGA GTCATTCGCT GAGCTTCGCG TCGCTGGTGT TCTACTCCTC GTGGTTCAAG 
TTGCACCATC CCGCGGCGTT CTGCGCCGCA CTGCTGCGCG CGCAGCCGAT GGGCTTCTAC 
TCACCGCAGA CGCTGGTCGC CGACGCCCGC AGGCACGGCG TCGACGTGCA CGGGCCGGAC 
GTGAACGCCA GCCTCGCGCA CGCCACGCTG GAGAACCACG GACTCGACGT GCGACTCGGT 
CTCGGCAGCA TCCGCCACAT CGGCGACGAG CTGGCGCAAC GTCTGGTGGA GGACCGAAAG 
CTCAACGGCC CCTTCGTTTC TCTGACCGAT CTGACCAGGC GGGTGCAGCT GACGGTCCCG 
CAGACCGAGG CGCTGGCGAC CGCGGGTGCA CTGGGATGCT TCGGGATCAC CCGGCGGGAG 
GGTCTGTGGG CGGCGGGCGC GGCTGCCACC GAACGGCCGG ATCGGCTCCC GGGGGTGGGT 
TCGTCCTCGC AGGTGCCGTC CCTGCCCGGC ATGACGGAAC TGGAGCTGAC GGCCGCGGAC 
GTGTGGGCGA CCGGGGTGTC CCCGGACCGC TACCCGACGG AGTTCCTGCG TGAAGACCTC 
GACGCGATGG GCGTGGTGCC CGCCGACCGG CTGTTGTCGG TGCGCGACGG CACCCGGGTG 
CTGGTGGCGG GGGCGGTGAC GCACCGGCAG CGGCCCGCCA CCGCACAGGG GGTGACGTTC 
CTGAACCTCG AAGACGAGAC CGGTATGGTC AATGTGCTCT GCTCCCAAGG CATCTGGGCC 
CGGCACCGCA AACTGGCGCA GACCGCGTCG GCGCTGGTGG TCCGCGGCAT CGTGCAGAAC 
GCCACCGGGG CCGTCACGGT GGTCGCCGAC AGGATGGGCC CGATCAACAT GAAGGTCGCG 
TCGAAGTCGC GCGACTTCCG CTGA 

 

Protein sequence

MRRVLEGKPR RAGWPIDAQV GDGGDSPAWS SKRGQYRAPE SRGPATGRSM PYAELHAHSA 
YSFLDGASTP EELVEEASRL GLRALALTDH DGLYGVVRFA EAAKELDVDT VFGAELSLGG 
GTRTDVPDPP GPHLLVLARG PEGYRRLSRQ LAAAHLAGGE KGVLRYDFDA LTEAAGGHWQ 
ILTGCRKGHV RQALLRGGDS AAEAALADLV DRFGRERVTV ELTHHGHPLD DERNAALAAL 
APRFGLTVIA TTAAHFAEPS RGRLAMAMGA IRARNSIDEA AGYLAPLGGS HLRSGEEMAR 
VFAHCPEVVT AAADLGEQCA FGLALIAPQL PPFEVPAGHT ENSWLRHLVM QGARERYGPP 
ERASRAYAQI EHELRVIEQL NFPGYFLVVH DITRFCRENA ILSQGRGSAA NSAVCYALKV 
TNVDPIANGL LFERFLSPAR DGPPDIDIDI ESDLREKAIQ YVYERYGREY AAQVANVITY 
RGRSAVRDMA RALGFSQGQQ DAWSKQISQW GNLADATHVE DIPEPVIDLA MQISHLPRHM 
GIHSGGMVIC DRPIADVCPV EWARMENRSV LQWDKDDCAA IGLVKFDLLG LGMLSALHYA 
IDLVAEHKGL EVDLAKLDLS EPAVYEMLQR ADSVGVFQVE SRAQMATLPR LKPRMFYDLV 
VEVALIRPGP IQGGSVHPYI KRRNGQEPVT YEHPSMERAL RKTLGVPLFQ EQLMQLAVDC 
AGFSAAEADQ LRRAMGSKRS TEKMRRLRGR FFEGMAELHG ISGDVARRIY EKLEAFANFG 
FPESHSLSFA SLVFYSSWFK LHHPAAFCAA LLRAQPMGFY SPQTLVADAR RHGVDVHGPD 
VNASLAHATL ENHGLDVRLG LGSIRHIGDE LAQRLVEDRK LNGPFVSLTD LTRRVQLTVP 
QTEALATAGA LGCFGITRRE GLWAAGAAAT ERPDRLPGVG SSSQVPSLPG MTELELTAAD 
VWATGVSPDR YPTEFLREDL DAMGVVPADR LLSVRDGTRV LVAGAVTHRQ RPATAQGVTF 
LNLEDETGMV NVLCSQGIWA RHRKLAQTAS ALVVRGIVQN ATGAVTVVAD RMGPINMKVA 
SKSRDFR