| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4846 |
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| Symbol | sdhA |
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| ID | 4976158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 5157818 |
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| End bp | 5159572 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640459075 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001136102 |
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| Protein GI | 145225424 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.892416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTG AACACCGCTA CGACGTCGTC ATCGTCGGCG CAGGTGGCGC GGGCATGCGT
GCCGCCGTGG AGGCCGGACC CCGCGTCCGC ACCGCGGTGC TGACCAAGCT GTACCCGACC
CGGTCGCACA CCGGCGCGGC CCAGGGCGGC ATGTGCGCCG CGCTGGCCAA CGTCGAAGAG
GACAACTGGG AGTGGCACAC CTTCGACACC GTCAAGGGCG GCGACTACCT CGCCGACCAG
GACGCCGTCG AGATCATGGC CAAAGAGGCC ATCGACGCGG TGCTCGACCT GGAGAAGATG
GGGATGCCGT TCAACCGCAC CCCCGAGGGA CGCATCGACC AGCGCCGGTT CGGCGGGCAC
ACCCGCGACC ACGGCAAGGC CCCCGTGCGC CGCGCCTGCT ACGCCGCCGA CCGCACCGGA
CACATGATCC TGCAGACGCT CTACCAGAAC TGCGTCAAGC ACGACGTCGA GTTCTTCAAC
GAGTTCTACG CGCTCGACAT CACGATGACC GAGACCCCGT CCGGGCCGGT CGCGACCGGT
GTCGTCGCCT ATGAGTTGGC GACCGGGGAC ATTCATGTCT TCCACGCCAA GGCCATCGTG
TTCGCCACCG GCGGATCCGG CCGGATGTAC AAGACCACGT CGAACGCGCA CACGCTGACC
GGCGACGGCC TGGGCATCAT CTTCCGCAAG GGACTTCCCC TGGAGGACAT GGAGTTCCAC
CAGTTCCACC CGACAGGTCT GGCCGGGCTG GGCATTCTGA TCTCCGAGGC CGTGCGCGGT
GAGGGCGGTC GTCTGCTCAA CGGCGACGGC GAGCGCTTCA TGGAGCGCTA CGCCCCGACG
ATCGTCGACC TCGCGCCGCG TGACATCGTC GCGCGCTCGA TGGTGCTGGA GGTGCTCGAG
GGCCGCGGCG CCGGACCGAA CAAGGACTAC GTCTACATCG ACGTGCGCCA CCTCGGCGAG
GACGTGCTGG AGGCCAAGCT TCCCGACATC ACCGAGTTCG CCCGCACCTA TCTCGGCGTG
GACCCCGTCA AGGAACTCGT GCCCGTCTAC CCGACATGCC ACTACGTCAT GGGCGGCATC
CCGACGACGG TCAACGGCCA GGTGCTCTCG GACAACACCA CCGTGGTGCC GGGCCTCTAC
GCCGCCGGCG AGTGCGCGTG CGTGTCGGTA CACGGGGCCA ACCGGCTGGG CACCAACTCG
CTGCTCGACA TCAACGTCTT CGGCCGTCGC GCCGGCATCG CCGCCGCGAA CTACGCACTG
GGACATGACT TCGTCGAGCT GCCGGAGAGC CCCGCCGAGA TGGTGGTCGG CTGGGTCGGC
GACATCCTCT CCGAGCACGG CAACGAGCGC GTCGCCGACA TCCGGGGCGC GCTGCAGCAG
TCGATGGACA ACAACGCCGC GGTGTTCCGC ACCGAGGAGA CGCTGAAGCA GGCGTTGACC
GACATCCACG CACTCAAGGA GCGCTACTCG CGTATCACGG TGCAGGACAA GGGCAAGCGC
TACAACAGCG ACCTGCTCGA GGCCATCGAG CTGGGCTTCC TGCTCGAGCT CGCCGAGGTC
ACCGTCGTCG GTGCGTTGAA CCGCAAGGAG TCTCGCGGCG GACATGCCCG CGAGGACTAC
CCGAACCGCG ACGACACCAA CTACATGCGC CACACCATGG CCTACAAAGA AGGTTCGGAC
CTTCTGAGTG ACATCCGCCT GGATTACAAA CCCGTCGTGA TGACGCGTTA CGAGCCGATG
GAACGGAAGT ACTGA
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| Protein sequence | MIVEHRYDVV IVGAGGAGMR AAVEAGPRVR TAVLTKLYPT RSHTGAAQGG MCAALANVEE
DNWEWHTFDT VKGGDYLADQ DAVEIMAKEA IDAVLDLEKM GMPFNRTPEG RIDQRRFGGH
TRDHGKAPVR RACYAADRTG HMILQTLYQN CVKHDVEFFN EFYALDITMT ETPSGPVATG
VVAYELATGD IHVFHAKAIV FATGGSGRMY KTTSNAHTLT GDGLGIIFRK GLPLEDMEFH
QFHPTGLAGL GILISEAVRG EGGRLLNGDG ERFMERYAPT IVDLAPRDIV ARSMVLEVLE
GRGAGPNKDY VYIDVRHLGE DVLEAKLPDI TEFARTYLGV DPVKELVPVY PTCHYVMGGI
PTTVNGQVLS DNTTVVPGLY AAGECACVSV HGANRLGTNS LLDINVFGRR AGIAAANYAL
GHDFVELPES PAEMVVGWVG DILSEHGNER VADIRGALQQ SMDNNAAVFR TEETLKQALT
DIHALKERYS RITVQDKGKR YNSDLLEAIE LGFLLELAEV TVVGALNRKE SRGGHAREDY
PNRDDTNYMR HTMAYKEGSD LLSDIRLDYK PVVMTRYEPM ERKY
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