| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4535 |
|---|
| Symbol | |
|---|
| ID | 4975847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4829752 |
|---|
| End bp | 4831215 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640458763 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_001135791 |
|---|
| Protein GI | 145225113 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00220219 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.295822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC GAGTCAGGCA GTCGTCGGCG GCCCGCATGG TGCTGCTCGT GACGCTGGGT
GCGCTCGCCG TGGCCGGTGC CGCCGTGGTG GTCTACCAGC AGTTCTTCAG TCCGTATACG
GTGGTCGCCT ATTTCCGTTC GGCGACAGCG ATTTACGCGG GCGACGAGGT GCGGGTCGCC
GGCGTGCGCG TCGGCACGAT CGAATCGATC GAGCCGCAGG GCACCCGGGC GAAGATGACC
ATGGCCATCG ACCACGACGT GCCGGTCCCG GCCGATGCGG AGGCGATCAT CGTCGCCCCG
AACCTGGTGT CGGCGCGCTA TGTCCAGTTG ACGCCGGCCT GGGGTGCCAC TCCGGAGACC
AGCGGACCGA CCATGGTCGA CGGCGCCGAG ATCGGCCAGG ACCGCACAGC CGTGCCGGTG
GAATGGGACG AGATCAAGCA GCAACTCACC CGCCTGGCCA CCGAACTCGG CCCGTCCGGG
GGAGTGTCCG AGACGTCGCT GGGACGGTTC ATCGACACCA CCGCGGCCGC GATGGACGGC
AACGGGAACA AACTGCGCGA GACCATCAGC CAACTCTCCG GTGTCGCACG GGTTCTCGGC
GAGGGCAGTG GCGACATCGT CGAGGTCATC ACGCACCTGG AGACGTTCGT GACCGCGCTG
CGCGACAGCA ACGTCCAGAT CGTGCAGTTC CAGGATCGGC TCGCCGACGT GACCCAGGTC
GTCGACGGCA GCCGCTCGGA ACTGAATTCG GCGATCACCA CACTCTCCGA AGCCGTCGGT
GAGGTTCAAC GTTTCGTGGA GGGCTCCAGA AGCCAGACCG CGGAACAGGT TCAGCGTCTG
GCCAACGTCA CCCAGGTGCT CGCCGACGAC AGCCTGGTGC TCAAGAACAT CCTGCACGCC
GCGCCCAATG CGCTGGTCAA CGGATACAAC ATCTACAACC CGGACACCGG CGGTCCGCGT
GGATCGTTCG CGATGAACAA CTTCTCCAAC CCGGTCACGT TGATCTGCTC GGCGATCGCG
GCGGTCGAAA ACGTCACCGC TGAGGAGTCC GGCAAGGCGT GTGCGCAGTA CCTCGGGCCC
GCGTTGCGGT TGATGAACTT CAACTACCTG CCGATGCCGT TCAACGCCTA TCTGGGCCCG
GCGCCGCAGA ACGTGATCTA CTCAGAGCCC GGTCTGGCCC CCGGCGGTGG CGGAACCCCG
CCCGCGCCCG CGGAGATCCC GCCTGCGGTG TCCGCCTACA CCGGCGCCGG GGACATCGCG
CCACCACCCG GCTGGTCGGA CCCGCCGCAA CCGCCGGGCG CCTTCGCGCC CCACGGTCTG
CCCGCGAACC CGTCGGGTGC GCTGTATCCG GGTGCGCCTG TCCCGCCGGG GGTTCCCTCG
CCGCCGCCGG CGGCCGGCCC CGCCGGTATC GCCGAGATGC TGCTGCCCGC AGAGGCGGCG
CCGTCGCCGG GAGGGAATCC GTGA
|
|---|
| Protein sequence | MTARVRQSSA ARMVLLVTLG ALAVAGAAVV VYQQFFSPYT VVAYFRSATA IYAGDEVRVA
GVRVGTIESI EPQGTRAKMT MAIDHDVPVP ADAEAIIVAP NLVSARYVQL TPAWGATPET
SGPTMVDGAE IGQDRTAVPV EWDEIKQQLT RLATELGPSG GVSETSLGRF IDTTAAAMDG
NGNKLRETIS QLSGVARVLG EGSGDIVEVI THLETFVTAL RDSNVQIVQF QDRLADVTQV
VDGSRSELNS AITTLSEAVG EVQRFVEGSR SQTAEQVQRL ANVTQVLADD SLVLKNILHA
APNALVNGYN IYNPDTGGPR GSFAMNNFSN PVTLICSAIA AVENVTAEES GKACAQYLGP
ALRLMNFNYL PMPFNAYLGP APQNVIYSEP GLAPGGGGTP PAPAEIPPAV SAYTGAGDIA
PPPGWSDPPQ PPGAFAPHGL PANPSGALYP GAPVPPGVPS PPPAAGPAGI AEMLLPAEAA
PSPGGNP
|
|---|
| |