Gene Mflv_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4321 
SymbolligB 
ID4975634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4590981 
End bp4592516 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content71% 
IMG OID640458548 
ProductATP-dependent DNA ligase 
Protein accessionYP_001135578 
Protein GI145224900 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID[TIGR00574] DNA ligase I, ATP-dependent (dnl1) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG TAGACGTCGC CGGCGCCTCG GCCGACGTCG CCGCGTCCTC GGCCCGGCTC 
GCGAAGATCG CCCGGATCGC CGAACTGCTG CGTCGGGCCG GCCGGGAGGA CGTCGCCATC
GTCGTGTCCT GGCTGTCCGG CGAGCTGACG CAGCGCCAGA TCGGCGTGGG CTGGGCATCC
CTGCGGTCGG TTCCCGCAGC CGCCGCGGAA CCCACCTTGA CGGTCGCCGA AGTCGAGCGC
AGGTTCGGCG AGATCGGCGC CACCGCCGGC AGGGGCTCGC AGGCGCGACG CGCCCAGCTT
CTCGCCGATC TCTTCTCCGC GGCAACCGAC GTCGAGCAGA CATTCCTGCG GCGCCTGCTC
ACCGGAGAGC TCCGGCAGGG CGCCCTCGTG GGGGTGATGG CCGACGCGGT GGCCAAAGCT
GCGGACCTTC CCGCCGCGAC GGTTCGTCGC GCCGCGATGC TCGGCGGAGA TCTTCCGGCC
GTGGCCGCCG CCGCTCTGAC CGACGGCGAC GCGGGTCTGG CGCAGTTCAC CCTGCAGGCT
GGAAAGGCCG TCGGGCCGAT GCTCGCCCAG ACCGCGGCCG ACGTCACCGA CGCTCTCGAC
CGGCTGGGCG GCACCGCGAT GTTCGAGGCG AAGCTCGACG GCGCGCGCGT ACAGATCCAC
CGTCGGGGGG ATTCCGTCTC GATCTTCACC CGCAGCCTCG ACGACGTCAC CGCGCGACTG
CCCGAGGTGG TCGAGGCGAC GCTCGCACTG CCCGTGACGG ACCTGATCGC CGACGCGGAG
GCCATCGCGC TGCGGCCCGA CGGACGCCCC CACCGCTTCC AGGTCACCGC GTCGCGGTTC
GGCCGCCGCG GCGGCACCTC CGATACCGCG TCGAACCCGC TGTCGGTGTT CTTCTTCGAC
CTGCTGCACG TCGACGGTGT CGATCTGCTC GACGCGCCCG CCCACGAGAG GATCGCGAGG
CTCGACGCGG TCACGCCCGA CAGCCAGCGG GTGGACCGCC TCGTGACCTC CGATCCCGGG
GCCGCGCAGG AGTTCTTCGA CAGGACGCTG GCGGCGGGAC ACGAGGGCGT GATGGCAAAA
TCGACCGTGG CGCCGTACGA GGCGGGCCGT CGTGGGGCGG GATGGCTGAA GGTCAAGCCG
GTGCACACAC TCGATCTCGT GGTGCTGGCC GTGGAGTGGG GGTCAGGTCG GCGGTCCGGC
AAGCTGTCCA ACATCCACCT CGGCGCCCGT GACCCCGGGA CCGGCGGATT CGTGATGCTG
GGTAAGACGT TCAAGGGCAT GACCGACGAG ATGCTGGCGT GGCAGACGCG GCGGTTCCTC
GATCTCGCCG ACGGAGACGC CACCGATCAC TACGTGGTGA AGGTGCGACC CGAGCAGGTC
GTCGAGATCG CCTTCGACGG ACTCCAGACC TCGACGCGAT ATCCCGGCGG CATGGCCCTG
CGCTTCGCGC GGGTGGTCCG CTACCGCGAC GACAAAGCCG CGACCGACGC CGACACCATC
GACACGGTGC GTGAGATCTA CGAACGCGGA AACTGA
 
Protein sequence
MLLVDVAGAS ADVAASSARL AKIARIAELL RRAGREDVAI VVSWLSGELT QRQIGVGWAS 
LRSVPAAAAE PTLTVAEVER RFGEIGATAG RGSQARRAQL LADLFSAATD VEQTFLRRLL
TGELRQGALV GVMADAVAKA ADLPAATVRR AAMLGGDLPA VAAAALTDGD AGLAQFTLQA
GKAVGPMLAQ TAADVTDALD RLGGTAMFEA KLDGARVQIH RRGDSVSIFT RSLDDVTARL
PEVVEATLAL PVTDLIADAE AIALRPDGRP HRFQVTASRF GRRGGTSDTA SNPLSVFFFD
LLHVDGVDLL DAPAHERIAR LDAVTPDSQR VDRLVTSDPG AAQEFFDRTL AAGHEGVMAK
STVAPYEAGR RGAGWLKVKP VHTLDLVVLA VEWGSGRRSG KLSNIHLGAR DPGTGGFVML
GKTFKGMTDE MLAWQTRRFL DLADGDATDH YVVKVRPEQV VEIAFDGLQT STRYPGGMAL
RFARVVRYRD DKAATDADTI DTVREIYERG N