Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4321 |
Symbol | ligB |
ID | 4975634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4590981 |
End bp | 4592516 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640458548 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001135578 |
Protein GI | 145224900 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTGG TAGACGTCGC CGGCGCCTCG GCCGACGTCG CCGCGTCCTC GGCCCGGCTC GCGAAGATCG CCCGGATCGC CGAACTGCTG CGTCGGGCCG GCCGGGAGGA CGTCGCCATC GTCGTGTCCT GGCTGTCCGG CGAGCTGACG CAGCGCCAGA TCGGCGTGGG CTGGGCATCC CTGCGGTCGG TTCCCGCAGC CGCCGCGGAA CCCACCTTGA CGGTCGCCGA AGTCGAGCGC AGGTTCGGCG AGATCGGCGC CACCGCCGGC AGGGGCTCGC AGGCGCGACG CGCCCAGCTT CTCGCCGATC TCTTCTCCGC GGCAACCGAC GTCGAGCAGA CATTCCTGCG GCGCCTGCTC ACCGGAGAGC TCCGGCAGGG CGCCCTCGTG GGGGTGATGG CCGACGCGGT GGCCAAAGCT GCGGACCTTC CCGCCGCGAC GGTTCGTCGC GCCGCGATGC TCGGCGGAGA TCTTCCGGCC GTGGCCGCCG CCGCTCTGAC CGACGGCGAC GCGGGTCTGG CGCAGTTCAC CCTGCAGGCT GGAAAGGCCG TCGGGCCGAT GCTCGCCCAG ACCGCGGCCG ACGTCACCGA CGCTCTCGAC CGGCTGGGCG GCACCGCGAT GTTCGAGGCG AAGCTCGACG GCGCGCGCGT ACAGATCCAC CGTCGGGGGG ATTCCGTCTC GATCTTCACC CGCAGCCTCG ACGACGTCAC CGCGCGACTG CCCGAGGTGG TCGAGGCGAC GCTCGCACTG CCCGTGACGG ACCTGATCGC CGACGCGGAG GCCATCGCGC TGCGGCCCGA CGGACGCCCC CACCGCTTCC AGGTCACCGC GTCGCGGTTC GGCCGCCGCG GCGGCACCTC CGATACCGCG TCGAACCCGC TGTCGGTGTT CTTCTTCGAC CTGCTGCACG TCGACGGTGT CGATCTGCTC GACGCGCCCG CCCACGAGAG GATCGCGAGG CTCGACGCGG TCACGCCCGA CAGCCAGCGG GTGGACCGCC TCGTGACCTC CGATCCCGGG GCCGCGCAGG AGTTCTTCGA CAGGACGCTG GCGGCGGGAC ACGAGGGCGT GATGGCAAAA TCGACCGTGG CGCCGTACGA GGCGGGCCGT CGTGGGGCGG GATGGCTGAA GGTCAAGCCG GTGCACACAC TCGATCTCGT GGTGCTGGCC GTGGAGTGGG GGTCAGGTCG GCGGTCCGGC AAGCTGTCCA ACATCCACCT CGGCGCCCGT GACCCCGGGA CCGGCGGATT CGTGATGCTG GGTAAGACGT TCAAGGGCAT GACCGACGAG ATGCTGGCGT GGCAGACGCG GCGGTTCCTC GATCTCGCCG ACGGAGACGC CACCGATCAC TACGTGGTGA AGGTGCGACC CGAGCAGGTC GTCGAGATCG CCTTCGACGG ACTCCAGACC TCGACGCGAT ATCCCGGCGG CATGGCCCTG CGCTTCGCGC GGGTGGTCCG CTACCGCGAC GACAAAGCCG CGACCGACGC CGACACCATC GACACGGTGC GTGAGATCTA CGAACGCGGA AACTGA
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Protein sequence | MLLVDVAGAS ADVAASSARL AKIARIAELL RRAGREDVAI VVSWLSGELT QRQIGVGWAS LRSVPAAAAE PTLTVAEVER RFGEIGATAG RGSQARRAQL LADLFSAATD VEQTFLRRLL TGELRQGALV GVMADAVAKA ADLPAATVRR AAMLGGDLPA VAAAALTDGD AGLAQFTLQA GKAVGPMLAQ TAADVTDALD RLGGTAMFEA KLDGARVQIH RRGDSVSIFT RSLDDVTARL PEVVEATLAL PVTDLIADAE AIALRPDGRP HRFQVTASRF GRRGGTSDTA SNPLSVFFFD LLHVDGVDLL DAPAHERIAR LDAVTPDSQR VDRLVTSDPG AAQEFFDRTL AAGHEGVMAK STVAPYEAGR RGAGWLKVKP VHTLDLVVLA VEWGSGRRSG KLSNIHLGAR DPGTGGFVML GKTFKGMTDE MLAWQTRRFL DLADGDATDH YVVKVRPEQV VEIAFDGLQT STRYPGGMAL RFARVVRYRD DKAATDADTI DTVREIYERG N
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