Gene Mflv_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4105 
Symbol 
ID4975419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4357072 
End bp4357836 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content72% 
IMG OID640458331 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001135363 
Protein GI145224685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00950461 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.23026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTC GACTGCAGCA GGCGCTCTCA TCCGGAGGGC CGGTGTGGGG AGGCTGGGTG 
GTGGGCCCGA CCGTGATCGG GCCCGAGGAA TACGCCGCCG CCGGGTACGA CTACGTCGGA
ATCGACGTCC AGCACAGCTA TCTCAGCGAC GCCGACGTCG CGCTGATGCT CCGCCGTCTC
GAGCACGTGC CGATCGCCAC GGTGGTGCGA CTGCCCGATG CGGCGCCCGC GCCGATCGGC
AGGGTGCTCG ACGCCGGCGC GGACGGCGTG ATCATCGCGA TGGTCGAGTC CGCAGCGGAC
GCCGCCGCCG CGGTCGCGGC CACCCGGTAC GCCCCCGGCG GTGTCCGCAG CTTCGGTCCG
TTGCGCGCAA GCCTCGGGCT GGACCCGTCG GCGCTGCAGG AGCGGGCGTC GGTGTTCGCG
ATGATCGAGA CGACGCGCGG ACTCGCCGCC GTGGACGAGA TCTGCCGGGT CGACGGACTG
ACGGGGATCT ACGTGGGGCC AGCGGATCTG GCGATCTCGA TGGGACACGG ACCGACCGAC
GCGTGGTCGC GCCGCGATGT GTTCGACGTC ATCCTGACCG CCCAGCGCGC CGCAGCCGCC
GCCGGTGTGG TCAGCGGCAT CCACGCCAGT GCCGGTTCCG CCGGTAACAT GCTGGCGCAG
AACGGATTCC AGATGATCAC GCTCGCCTCG GAGTCGCAGG CGTTGCGCCG GGGCGCGGCC
GCACATCTGT CCGACGCGCG AGGGGAGTCC GGCGATGGCC GCTGA
 
Protein sequence
MTSRLQQALS SGGPVWGGWV VGPTVIGPEE YAAAGYDYVG IDVQHSYLSD ADVALMLRRL 
EHVPIATVVR LPDAAPAPIG RVLDAGADGV IIAMVESAAD AAAAVAATRY APGGVRSFGP
LRASLGLDPS ALQERASVFA MIETTRGLAA VDEICRVDGL TGIYVGPADL AISMGHGPTD
AWSRRDVFDV ILTAQRAAAA AGVVSGIHAS AGSAGNMLAQ NGFQMITLAS ESQALRRGAA
AHLSDARGES GDGR