Gene Mflv_4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4104 
Symbol 
ID4975418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4356351 
End bp4357082 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID640458330 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001135362 
Protein GI145224684 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0160173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.32816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG ATCGTATCGC TCTGGTCACC GGCGCGGCCC GCGGACAGGG CGCGGCGATC 
GTGACCAGGC TGCTGCAGGA CGGCTTCCGG GTGGCCGCGT GTGATCTGCT CGGCGACGAC
GTGACCCGCA CCGTGGCCGC ACACGACACC GACCACGCCG TCGCGATCGA ACTCGACGTC
ACCTCGGCCG AGCAGTGGAC CCGGGCAGTC GGTGAGGTCG TCGACAGGTT CGGCGGACTG
AGCACGCTGG TCAACAACGC GGGAGTGCTG CACCGGGCGT CGCTGGCCGA TGAGACGCCG
GACGGTTTCG AGGGCAGCTG GCGGGTGAAC TCACTCGGCC CGTTCCTCGG GATCCAGGCC
GCACTGCCGC ACCTGAAGGC GGCCGAGGGT GCAGCGATCG TCAACACGTG CAGCACCGGC
GCGATCCGTC CGTTCCCCAA CCACGCCGCC TACGGTTCGT CGAAGTGGGC GCTGCGCGGC
CTGACCCAGG TCGCGGCGGT CGAGCTCGCG CCGTCGGGGA TCAGGGTCAA CGCGGTGTTC
CCGGGCCCCG TCGAGACCCC GATGCTGGAC GCGAACACCC AGACCAGGTT GGCCGCGAAC
GCATTGATGG GCCGTATCGG CAAGCCGATG GAGATCGCCG ACGCCGTCGC GTTCCTGGTC
TCCGAGCACG CCACGTTCAT CACCGGCTCC GAGCTCATCG TCGACGGTGG GCAGTCACTG
CAGATTGGAT GA
 
Protein sequence
MAADRIALVT GAARGQGAAI VTRLLQDGFR VAACDLLGDD VTRTVAAHDT DHAVAIELDV 
TSAEQWTRAV GEVVDRFGGL STLVNNAGVL HRASLADETP DGFEGSWRVN SLGPFLGIQA
ALPHLKAAEG AAIVNTCSTG AIRPFPNHAA YGSSKWALRG LTQVAAVELA PSGIRVNAVF
PGPVETPMLD ANTQTRLAAN ALMGRIGKPM EIADAVAFLV SEHATFITGS ELIVDGGQSL
QIG