| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3857 |
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| Symbol | |
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| ID | 4975173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 4119971 |
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| End bp | 4121137 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640458081 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001135117 |
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| Protein GI | 145224439 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.116252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGACG ATCCGCGTCC GACCGGAGGG CTCGACGACT TCTTCGACAG TGCGCCCTGC
GGGCTGCTGC TGACCTCACC CGACGGCCGG ATCATCCGCG CCAACGAGAC GTTCAGCCGG
TGGGTCGGAT ACCGGTCCGA GCACCTCACC GGCCGGCAGT TCCCCGATCT GCTCGCCGCC
GGCAGCAGGA TTCACTACGA GACCCACTTC GTGTCGATGC TCCACATGAA CGGCTCGCTC
GACGGCGTCG CGGCCGATCT GCTCACCGCA GACGGAACGA GGCTGGCGGG GTTCGTCACC
GCGAACGTCG AGCGCGATGC CGCGGGGGCG GTGGTGGCGC TGCGGATCGC GATCCAGGAT
GCCAGCGAAC GCCGTTCGTA TGAGCGCGAA CTCCTCGAGA CCCGGCGCCG CGCCGACCGT
GAACGGGAGC GTGCGCAGGT GCTCGCCGCG ACCCTGCAGC GGTCCCTGAT CCCGCCGACG
TTGTCGCCGC CGCGCGGGTT GACCGCGGCG GCCCACTACC ACAACGCCTC CCGCGACGAC
GTCGGTGGAG ATTTCTACGA TCTCTTCCCG ATGGCCGAGG ACCGATGGGG CATGTTCCTC
GGCGACGTGT CGGGTAAGGG TGCCGGTGCG GCCGCCGTGA CCTCGCTGAC GCGCTACACC
CTGCGCGCCG CCGCGGTCAA CGACCGTGAC CCGGTCGCGG TGTTGCACAC CCTCGACGCG
GTCCTCAGCC ACGAGTTCCA CGGCGACGAC CCCCGGTTCT GCACGGTGAT CTTCGGGGTG
ATCACCGCGG CACCCGACGG CTTCGACGTG CAGCTCGCCA CCGGCGGTCA TCCCCCCGCG
CTGCTGCTGC CGGTGGACGG CCCCGCACGC TACGTCGCCA CCCCCGGGGG TCAGGCCGTG
GGGCTGATCA GGAACCCGAG ATTCGTCTCG ACCAGCGTGC ATCTGGGCCC CGGGGACACG
CTGGTGATGT ACACCGACGG TCTGACCGAG GCGAAGACGG GACGCACGAG GCGCTTCGAC
GACGACGACG CCCTGCTCGA GTTCGCCGGG CGCCACACGC CGACCGACGC CGGCGCTTTC
GTCGAGGCCG TTCGCGTGCT GCTCGCCAGC TTCGGCGACG GACTCGAAGA CGATGCCGCG
GTGATCGCGC TCAGCGTGCC CCGCTGA
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| Protein sequence | MTDDPRPTGG LDDFFDSAPC GLLLTSPDGR IIRANETFSR WVGYRSEHLT GRQFPDLLAA
GSRIHYETHF VSMLHMNGSL DGVAADLLTA DGTRLAGFVT ANVERDAAGA VVALRIAIQD
ASERRSYERE LLETRRRADR ERERAQVLAA TLQRSLIPPT LSPPRGLTAA AHYHNASRDD
VGGDFYDLFP MAEDRWGMFL GDVSGKGAGA AAVTSLTRYT LRAAAVNDRD PVAVLHTLDA
VLSHEFHGDD PRFCTVIFGV ITAAPDGFDV QLATGGHPPA LLLPVDGPAR YVATPGGQAV
GLIRNPRFVS TSVHLGPGDT LVMYTDGLTE AKTGRTRRFD DDDALLEFAG RHTPTDAGAF
VEAVRVLLAS FGDGLEDDAA VIALSVPR
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