| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3359 |
|---|
| Symbol | |
|---|
| ID | 4974679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 3542584 |
|---|
| End bp | 3544038 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640457581 |
|---|
| Product | 6-phosphogluconate dehydrogenase |
|---|
| Protein accession | YP_001134623 |
|---|
| Protein GI | 145223945 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.191261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.983915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGT CCGGAACCAC GGGTAGCGCC CAGATCGGCG TCACCGGTCT GGCGGTGATG
GGATCGAACA TCGCGCGTAA CTTCGCGCGG CACGGCTACA CCGTTGCTCT GCACAACCGG
TCGGTCGCCA AGACCGACGC GCTGCTCGCC GAGCACGGTT CGGACGGCAA TTTCGTGCGC
AGCGAGACGA TCGCGGAGTT CCTCGATGCG CTGGAGAAGC CGCGCCGGGT GCTGATCATG
GTCAAGGCCG GCGACCCGAC CGACGCGGTG ATCAATGAGC TCGCCGACGC GATGGAAGAA
GGCGACATCA TCATCGACGG CGGCAACGCC CTCTACACGG ACACCATCCG GCGGGAGAAG
GCGATCCGTG AGCGGGGGCT GCACTTCGTC GGCGCCGGCA TCTCCGGTGG TGAGGAGGGC
GCGCTCAACG GGCCGTCGAT CATGCCCGGG GGCCCGGCCG AGTCGTATGC CTCGCTGGGG
CCGCTGCTCG AGGAGATCTC GGCCCACGTC GACGGCGTGC CGTGCTGCAC CCATATCGGC
CCCGACGGTG CGGGACATTT CGTGAAGATG GTGCACAACG GCATCGAGTA CTCCGACATG
CAGCTCATCG GTGAGGCCTA CCAGTTGCTG CGCGACGGGC TGGGCAAGAG CGCCCCCGAG
ATCGCCGACG TGTTCGACGA GTGGAACGCC GGCGACCTGG ACAGCTTCCT GGTCGAGATC
ACCGCCCAGG TGCTGCGCCA GACCGACGCC ACGACCGGCA CGCCGCTGGT CGATGTGATC
CTCGACGAGG CCGAGCAGAA AGGCACCGGC CGCTGGACGG TCAAGTCGGC CCTGGATCTG
GGCGTGCCGG TGACGGGCAT CGCCGAGGCG GTGTTCGCCC GCGCGCTGTC GGGCTCGGTG
GCCCAGCGCA AGGCCACCAC AGGCCTGGCG TCCGGGGATC TCGGTGAGAA ACCCGGCGAT
GCAGAGCAGT TCGTCGAGGA CATCCGGCAG GCGCTGTACG CGTCGAAGAT CATCGCCTAC
GCCCAGGGCT TCAACCAGAT CCAGGCCGGC TCCGACGAGT ACGACTGGGA CATCAAGCCC
GGTGACATGG CGCGGATCTG GCGGGGCGGC TGCATCATCC GGGCCAAGTT CCTCAACCGG
ATCACCGACG CGTTCGACAA CGACCCCGGT CTGCCGACGC TGATCGTCGA CCCGTACTTC
CGCGACGCCA TCGAGGCGGC GATCGACAGC TGGCGCCGCG TCGTGGTCAA GGCCACCGAG
CTGGGCATCC CGATCCCCGG CTTCAGCTCG GCGCTGTCCT ACTACGACGG TCTGCGCACC
GAGCGCCTGC CCGCCGCACT GACCCAGGGG CTGCGTGACT TCTTCGGCGC GCACACCTAC
GGCCGCATCG ACACCGACCG CGAGAGGCGC TTCCACACGC TGTGGAGCGG CGACCGCACC
GAGGTCGAGG CCTAA
|
|---|
| Protein sequence | MSSSGTTGSA QIGVTGLAVM GSNIARNFAR HGYTVALHNR SVAKTDALLA EHGSDGNFVR
SETIAEFLDA LEKPRRVLIM VKAGDPTDAV INELADAMEE GDIIIDGGNA LYTDTIRREK
AIRERGLHFV GAGISGGEEG ALNGPSIMPG GPAESYASLG PLLEEISAHV DGVPCCTHIG
PDGAGHFVKM VHNGIEYSDM QLIGEAYQLL RDGLGKSAPE IADVFDEWNA GDLDSFLVEI
TAQVLRQTDA TTGTPLVDVI LDEAEQKGTG RWTVKSALDL GVPVTGIAEA VFARALSGSV
AQRKATTGLA SGDLGEKPGD AEQFVEDIRQ ALYASKIIAY AQGFNQIQAG SDEYDWDIKP
GDMARIWRGG CIIRAKFLNR ITDAFDNDPG LPTLIVDPYF RDAIEAAIDS WRRVVVKATE
LGIPIPGFSS ALSYYDGLRT ERLPAALTQG LRDFFGAHTY GRIDTDRERR FHTLWSGDRT
EVEA
|
|---|
| |