Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_2416 |
Symbol | |
ID | 4973737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 2517396 |
End bp | 2518139 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640456629 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001133681 |
Protein GI | 145223003 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00485209 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAATCGG GCGCGACGAC GTTCTTAAAC GGGACGACGC ATTTAAAGCA GTCGCTTGAC TTACCCGGTG TGACGCGGTT CACTGACAGG GTGACGACTG CGAGGACTGT GCGCGCCGAC CGCGCGACCG GCACCCAAGA GGCGATCCTG AAGGCGGCGG AACGGCTGTA CGCCGAGCAC GGCGTGTTCG CGGTGTCCAA CCGGCAGGTC AGTGAGGCCG CAGGGCAGGG CAACAACGCC GCCGTCGGCT ATCACTTCGG CACCAAGGCG GACCTGGTGC GCGCGATCGA ACACAAGCAC CGCGGCCCCA TCGAGGAGTT GCGCGAGCAA CGGGTCGCCG CCATCGATTC CTCGGGGGAC ATGCGCGACT GGGTGGCCGC GCTGGTGTGT CCGCTGACCG ATCATCTTGC CGCCCTGGGC AATCCGACCT GGTATGCGCG CTTCGCCGCC CAGGTGATGA CCGACCCCGC CTATCACAAC ATGATCGTCA AGGACGCGTT GTCCTCGCCG TCACTTGTTC GGGTGCTCGA CGGGATCAAC GGCTGTCTGC CCGATTTGCC GGTCGACGTG CGGGTCGAGC GAAACATCAT GGGCCGCAAC CTGTTGATGC ACAGCTGCGC TGACCGTGAG CGGCTGTTGG CCCAGGGGTC GCCGGTGCCC CGCGGATCGT GGCAGTCGGC GGCGACCGGC CTGATCGACG CAATCATCGG TCTGTGGCAC GCGCCGGTGA CGGAGCGCCC CTGA
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Protein sequence | MQSGATTFLN GTTHLKQSLD LPGVTRFTDR VTTARTVRAD RATGTQEAIL KAAERLYAEH GVFAVSNRQV SEAAGQGNNA AVGYHFGTKA DLVRAIEHKH RGPIEELREQ RVAAIDSSGD MRDWVAALVC PLTDHLAALG NPTWYARFAA QVMTDPAYHN MIVKDALSSP SLVRVLDGIN GCLPDLPVDV RVERNIMGRN LLMHSCADRE RLLAQGSPVP RGSWQSAATG LIDAIIGLWH APVTERP
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