Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_2250 |
Symbol | |
ID | 4973572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 2333313 |
End bp | 2335217 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640456459 |
Product | ABC transporter, transmembrane region |
Protein accession | YP_001133516 |
Protein GI | 145222838 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.993927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC CCCTGGCCCG CGGGATCCGG ATGGGAGAAC CGCCGCAGGA GCGTTCGCGC GACTTCAAGG CCTCGGCGAT CCGGCTGCTG AGGCGACTCA CCCCGCAGCG GGGGATGACC ATCGCGGTCA TGCTTCTCGG CGTGGGCGGC ATCGCGATCG GGGTCGTCGG GCCGCGGATC CTCGGCCACG CGACCGATCT GCTGTTCAAC GGCGTCATCG GCCGGCAGCT GCCGGCGGGG TCGACCAAGG AGCAGGCCAT CGAGGCAGCC CGCGCCAGGG GCGACACCAC GTTCGCCGAT CTGCTCTCCG GTATGGACGT CGTCCCGGGC CAGGGGGTCG ACTTCGCGGC AGTGGCCCGC ACGCTGATGC TCGCGCTGGG CCTGTATCTG GTTGCGGCGC TGATGGTCTG GATCCAAGCC CGGCTGCTCA ACGTCGTCGT GCAGCGCACC ATGGTGTCGC TGCGCGCCGA CGTCGAGGAC AAGGTGCACC GGCTACCGTT GCGCTACTTC GATTCCCGGC AGCGCGGGGA GGTCCTCAGC CGGGTCACCA ACGACGTGGA CAATCTGCAG CAGTCGCTGA CGATGTCGAT CACTCAACTG CTGACCTCCG TGCTGACGGT GGTGGCGGTG CTGGTGATGA TGCTGACGAT CTCACCGATG CTCACGCTGC TGACCGTGGT GACGGTGCCG TTGTCGCTGT GGGTGACCCG TTCCATCGCG AAGCGGTCCC GGAAACTGTT CGTCGCGCAG TGGACCAACA CGGGTCGGCT CAACGCGCAC ATCGAGGAGA CCTACAGCGG ATTCACCGTC GTCAAGACGT TCGGACACCG GGCCCGCGCC GAGGATCAGT TCCGCGAGCT CAACGACGAC GTCTACCACG CCAGCTTCGG CGCGCAGCTC CTCTCCGGCC TCGTCTCCCC CGCGACGATC TTCATCGGCA ACCTGAGCTA CGTCGCGGTC GCCGTGGTGG GTGGTCTGCA GGTCGCGACC GGACAGATCA CCCTCGGCGG CATCCAGGCG TTCATCCAGT ACGTCCGCCA GTTCAACCAG CCGCTGACCC AGATCGCCGG GATGTACAAC ACCATGCAGT CCGGAATCGC CAGCGCGGAG CGGGTCTTCG ACCTCCTCGA CGCCGAGGAG GAACCCGCTG ATCCGGTCGA GGCGCTGCCC GCGTCTGCCG ACCGGCGCGA CGGCCGTGTC GAATTCGATG GCGTCTGGTT CAGCTACCGG CCCGGGACCC CGGTCGTCGA GGACCTGTCG CTGGTCGCCG AACCAGGGCA GACGATCGCC ATCGTCGGAC CCACGGGTGC CGGTAAGACC ACCCTGGTGA ACCTGCTGAT GCGGTTCTAC GACGTGGATT CGGGCCGCAT CCTGCTCGAC GGCACCGACA TCACGACGGT CAGCCGCGGG TCGCTGCGGT CCCGGATCGG CATGGTGCTG CAGGACACCT GGTTGTTCGC GGGAACCATT TACGACAACA TCGCCTACGG CCGGCCGGAC GCCGCTCACG ACGAGGTGAT CGAGGCGGCC ACCGCGGCGT ATGTGGACCG CTTCGTGCAC ACGCTGCCGG ACGGCTACGA CACCCGCATC AACGACGGCG GCACCAACAT CAGCGCCGGC GAGAAGCAGC TCATCACCAT CGCGCGCGCG ATTCTGGCCC GCCCCCAGGT GCTCGTCCTC GACGAGGCGA CCAGCTCGGT GGACACCCGG ACCGAGGTCC TGATCCAGCA CGCGATGCGC GAACTGCGCC GCGACCGCAC CAGTTTCATC ATCGCGCACC GGCTCTCGAC CATCCGCGAT GCCGACACCA TCCTGGTGAT GGAGGCGGGC AGGATCGTCG AACGCGGCAC CCACAGTGAG CTGCTGGCAC GTCGCGGGGA GTACTGGACG ATGGTCAACC GGTAA
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Protein sequence | MSGPLARGIR MGEPPQERSR DFKASAIRLL RRLTPQRGMT IAVMLLGVGG IAIGVVGPRI LGHATDLLFN GVIGRQLPAG STKEQAIEAA RARGDTTFAD LLSGMDVVPG QGVDFAAVAR TLMLALGLYL VAALMVWIQA RLLNVVVQRT MVSLRADVED KVHRLPLRYF DSRQRGEVLS RVTNDVDNLQ QSLTMSITQL LTSVLTVVAV LVMMLTISPM LTLLTVVTVP LSLWVTRSIA KRSRKLFVAQ WTNTGRLNAH IEETYSGFTV VKTFGHRARA EDQFRELNDD VYHASFGAQL LSGLVSPATI FIGNLSYVAV AVVGGLQVAT GQITLGGIQA FIQYVRQFNQ PLTQIAGMYN TMQSGIASAE RVFDLLDAEE EPADPVEALP ASADRRDGRV EFDGVWFSYR PGTPVVEDLS LVAEPGQTIA IVGPTGAGKT TLVNLLMRFY DVDSGRILLD GTDITTVSRG SLRSRIGMVL QDTWLFAGTI YDNIAYGRPD AAHDEVIEAA TAAYVDRFVH TLPDGYDTRI NDGGTNISAG EKQLITIARA ILARPQVLVL DEATSSVDTR TEVLIQHAMR ELRRDRTSFI IAHRLSTIRD ADTILVMEAG RIVERGTHSE LLARRGEYWT MVNR
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