Gene Mflv_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2104 
Symbol 
ID4973426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2180967 
End bp2182313 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content68% 
IMG OID640456313 
Productvirulence factor Mce family protein 
Protein accessionYP_001133370 
Protein GI145222692 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.384256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC TCCGCCTCTG GGTCGGCCTC GTGCTGGTGG CGTTGCTCGT TGTCGGCGTC 
GCGCTGCTGG TGCGCACCAC CGACAAGGTG AACCGCGTGA ACGTCGTCGC GTACTTCGAG
AACAGCAACG GCATCTACGA GGGTGACGAC GTGCGCATCC TCGGCGTGCC CGTCGGCCGG
ATCACCTCGA TCGAGCCCGA ACCCGAACGG GTGAAGATCT CGTTCTGGTA CGACGACCGA
TACGACGTCC CGGCCGACGC GGCCGCCGCG ATCCTGTCTC CGGCGCTGGT CACCGCGCGG
GCGATCCAGC TCACCCCGGT CTACACCGGC GGTCCGGTGC TGGGTGACAA CGCGGTGATC
CCGTTGCAGC GCACCGTCGT TCCGGTCGAA TGGGATCAGG TGCGGGCCCA GTTGGAGCGG
CTCAGCGAGA CCCTGCAGCC GACCGAGCCC GGTGGGGTCA GCCCGCTGGG CTCGGTGATC
AACACCACCG CCGAGAATCT GCGCGGCCAG GGCGCCGACA TCCGCGAGAC GGTGATCAAA
CTGTCCCAGG CGTTCTCCGC GCTGGGGGAC CGCAGCACCG ACATCTTCTC GACCATCAAG
AATCTCGCCA TCCTGGTGTC GGCGCTGCAG GACAGCACCG ATCTGATGCG TCAGCTCAAC
CAGAACCTCG CATCGGTGAG CGGTCTGCTG ACCGACGGGC CCGACGAGGT GGCCAATGCG
ATCCGGGATC TCAATGCGGC GGTCGGTGAC GTGCAGAGCT TCGTCGCGGA GAACCGCGAG
TCGCTGGGCA CCACCTCGGA CAAACTGGCC GGGGTCACCA CGGCGCTCAC CGAGAGCCTC
GAGGACATCA AGCAGTTCCT GCACGTCGCC CCGAGCACGT TCCAGAACTA CATCAACATC
TGGCAGCCCG CCCAGGGTGC CGTCAGCAGC GTGCCGCAGA TCAACAACTT CGCCAATCCG
ATCCAGTTCC TGTGCGGCGC AGTGCAGGCC GCGTCCCGGC TGGGCGCCGA GGAGTCGGCG
AAGCTGTGCG TGCAGTATCT GGCGCCGATC ATCAAGAACC GTCAGTACAA CTTCCCGCCG
CTGGGTCTCA ACCAGCTCGT CGGCGCCACC ACCCGGCCCA ATGAGCTGAC CTACAGCGAG
GATTGGCTGC GGCCCGACTA CATCCCGCCC GGCGGCCCCG CGCCGGCGCC GGCCGCAGGG
GTCCCGACCG GAGATCCGGC GGGCCTGCCG CCCGGTCAGG GTCCGCTGTT GCTCGACGCA
CCGCCCGGCG CCGCCGAGAT GCCGGTGCCC ACCAACCCGA CCGACGGGTT GCACGGGATG
ATGGTGCCAC CGGGAGGTGG CTCATGA
 
Protein sequence
MKNLRLWVGL VLVALLVVGV ALLVRTTDKV NRVNVVAYFE NSNGIYEGDD VRILGVPVGR 
ITSIEPEPER VKISFWYDDR YDVPADAAAA ILSPALVTAR AIQLTPVYTG GPVLGDNAVI
PLQRTVVPVE WDQVRAQLER LSETLQPTEP GGVSPLGSVI NTTAENLRGQ GADIRETVIK
LSQAFSALGD RSTDIFSTIK NLAILVSALQ DSTDLMRQLN QNLASVSGLL TDGPDEVANA
IRDLNAAVGD VQSFVAENRE SLGTTSDKLA GVTTALTESL EDIKQFLHVA PSTFQNYINI
WQPAQGAVSS VPQINNFANP IQFLCGAVQA ASRLGAEESA KLCVQYLAPI IKNRQYNFPP
LGLNQLVGAT TRPNELTYSE DWLRPDYIPP GGPAPAPAAG VPTGDPAGLP PGQGPLLLDA
PPGAAEMPVP TNPTDGLHGM MVPPGGGS