| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2079 |
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| Symbol | ispH |
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| ID | 4973401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 2156470 |
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| End bp | 2157471 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640456288 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001133345 |
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| Protein GI | 145222667 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00954639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.119575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGA CTGTCAACAT GGGCATCCCG GGTGCCGCCA GCTCGGTCGT CGAACGGACG
GCGGGCAAAC GTGTCCTCCT CGCCGAACCG CGCGGATACT GCGCGGGCGT CGATCGTGCC
GTCGAGACCG TCGAACGCGC CCTCGAGAAG CACGGTGCGC CGATCTACGT GCGCCACGAG
ATCGTGCACA ACCGCTACGT CGTCGACACG CTGGCCAAGG CCGGCGCGAT CTTCGTCGAG
CAGACCGACG AGGTGCCCGA GGGTGCCATC GTGGTGTTCT CCGCGCACGG GGTCGCACCG
ACGGTGCATG TCGAGGCCGC AGCCCGGAAC CTGAAGACCA TCGATGCGAC CTGCCCGCTG
GTCACCAAGG TGCACAACGA GGCCAAGCGT TTCGCCCGCG ACGACTACGA CATCCTCCTG
GTCGGCCACG AAGGCCACGA GGAGGTCGTC GGCACGGCCG GCGAGGCACC CGACCACGTA
CAGGTCGTCG ACAACCCCGA CGCCGTCGAC AACGTCGTCG TGCGTGACCC GAACAAGGTC
ATCTGGCTGT CCCAGACCAC GCTGAGCGTC GACGAGACGA TGGAGACGGT CCGCCGGCTG
CGCGAGAAGT TCCCGACGCT GCAGGATCCG CCCAGCGACG ACATCTGCTA CGCCACCCAG
AACCGTCAGG TCGCGGTCAA GGCGATGGCG CCCGAGTGCG AACTGGTGAT CGTGGTCGGC
TCGAAGAACT CGTCGAACTC GGTGCGGCTG GTCGAGGTGG CCCTCGGCGC CGGGTCGCGT
GCGGCGCACC TGGTGGACTA CGCCGAGGAC ATCGATCCGG CCTGGCTCGA CGGTGTCACG
ACCGTCGGGG TGACCTCCGG TGCCTCGGTC CCCGAGATCC TGGTGCGCGG TGTGCTCGAC
CGTCTCGCCG AGCACGGTTT CGACACCGTG CAGCCGGTGA CGACGGCCAA CGAGACGCTG
GTCTTCGCCC TGCCGCGGGA GATCCGTCCG GCGCGCGCGT GA
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| Protein sequence | MPPTVNMGIP GAASSVVERT AGKRVLLAEP RGYCAGVDRA VETVERALEK HGAPIYVRHE
IVHNRYVVDT LAKAGAIFVE QTDEVPEGAI VVFSAHGVAP TVHVEAAARN LKTIDATCPL
VTKVHNEAKR FARDDYDILL VGHEGHEEVV GTAGEAPDHV QVVDNPDAVD NVVVRDPNKV
IWLSQTTLSV DETMETVRRL REKFPTLQDP PSDDICYATQ NRQVAVKAMA PECELVIVVG
SKNSSNSVRL VEVALGAGSR AAHLVDYAED IDPAWLDGVT TVGVTSGASV PEILVRGVLD
RLAEHGFDTV QPVTTANETL VFALPREIRP ARA
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