| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1946 |
|---|
| Symbol | |
|---|
| ID | 4976618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2023519 |
|---|
| End bp | 2025063 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640456156 |
|---|
| Product | putative DNA-binding protein |
|---|
| Protein accession | YP_001133214 |
|---|
| Protein GI | 145222536 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2508] Regulator of polyketide synthase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACACGG CCGGACCAGG CGTAGCGTCA ACGTTCGTGA TCACGCTGGA TCGCCTGATC
AACGTCCTCG GCGGCTACGG CGCGCGCTGG CAGGGAGGTT CGGCGGACAG GCAGACCGAG
CTTCGCAGCG TGGTGCTGCC GGAGGTCGTC GACGGCCGCA CCGTCTCCGG GGACGTGCTG
CTCGCGATCG GCGCCACCAC CACCGCCGAA GCGGTCCGCT GGGCCCGGGC CGCGCGCGCC
GTCGTGGTGC TGACCCGGGG TGGCGGCGAT CCCGAACCCG ACACCGCCGG TGTCGCGGTC
CTCGTCGTCG ACTCGGCGAT GCCGTGGAGC GAGTTCGCCG CGATCGTGTA CGGGCTGGTC
ATGGAAGGCC GTGAGACCGA GTCGGGGCGC GGCCCCACCG ACCTGTTCGC GCTCGCCGAC
AACCTGTCCA ACGCCGTGGG TGGCGCCGTC GTCATCGAGG ACCGGGCCTC GCAGGTGCTC
GCGTTCTCCC GCGGCCAGCT CGACGCCGAC CCGGCCCGAG CGAAGACGAT CCTGGCCCGG
CAGGCGCCGC CGTCGCTGCG CGCCGTGTTC GACGCGCATG GCGTCTTCGC CCACCTGGCC
GTGTCCGACG AGCCGCTGTT CGTCCCCGGT GACGACGCCG TCGGGCTCAC CGGCCGGATG
GTGGTGGCCG CGCGCGCCGG TCGCGAACTG CTGGGCTCGG TGTGGGTGGC GGTGCCGAAA
CCGCTCGCCG GGCAGCAGCG ACAGGCCCTG GCCGACGGCG CACGCACCGT CGCCCTGCAC
CTACTGCGGT CGCGGGCCAG CGCCGACCTC GAACGTCAGG TCGAATCGGA GATGGTGATC
CGGCTGCTGG AAAGCCCGGC GGATGCCGAG ACGGTCGCCA GCCGCCTCGG ACTTCCGCCG
TCGGCGCTGC GCGTGATCGC GCTGCGCGCC CTCGACACGA CGGGCAGGCA TTCGGCCCTG
CTGCAGATGT TCGAACGCGC GACCGCGGGG TTCGGCTGGT CCCGTCCCTC CCGCAGCGCG
CTGGCCGACG CGACGGTCTA CACCGTGCTG GCAGCCGAAC CCGCCGCGGT GGCACGTGAC
TGGGTCTCCG CTTTGATCTC CACGCTGCCC GACCAGGTCA CCGTGAAGGC GGGCATCAGC
GCGCCCGCGG CAGCGACCGA CCTCGCGGTG GCCCGCACCG AGGCCGACGA ATGCCTGGCA
CTGCAGGAGA GCACCGACGC CGGCGAGCCG CCGGCCTACG ACGAATCATG GGACGACCTG
CTGTTGCGGC GGTTGAAGAC GGCCGCGCGC TCCGGACGGA CCCCGACGCG CGGCGCGGTC
GCCGAGCTGC GGGAACACGA CAGCGCGCAC GGCACCGCGT ACGTCCCGAC GTTGCGGGCC
TGGCTGCAGG AACGCGGTGA CCCGGTGCGC ACCGCGGCGC ACCTCGGGGT GCACGAGAAC
ACCGTCAGAT ACCGGATGCG CCGGATGGCC GAACTCACCG AGCTCCACCT CGACGACGCG
CGTAAGCGAT TCGCGATGAC GATCGAGCTT GCCGTACTCG ACTGA
|
|---|
| Protein sequence | MHTAGPGVAS TFVITLDRLI NVLGGYGARW QGGSADRQTE LRSVVLPEVV DGRTVSGDVL
LAIGATTTAE AVRWARAARA VVVLTRGGGD PEPDTAGVAV LVVDSAMPWS EFAAIVYGLV
MEGRETESGR GPTDLFALAD NLSNAVGGAV VIEDRASQVL AFSRGQLDAD PARAKTILAR
QAPPSLRAVF DAHGVFAHLA VSDEPLFVPG DDAVGLTGRM VVAARAGREL LGSVWVAVPK
PLAGQQRQAL ADGARTVALH LLRSRASADL ERQVESEMVI RLLESPADAE TVASRLGLPP
SALRVIALRA LDTTGRHSAL LQMFERATAG FGWSRPSRSA LADATVYTVL AAEPAAVARD
WVSALISTLP DQVTVKAGIS APAAATDLAV ARTEADECLA LQESTDAGEP PAYDESWDDL
LLRRLKTAAR SGRTPTRGAV AELREHDSAH GTAYVPTLRA WLQERGDPVR TAAHLGVHEN
TVRYRMRRMA ELTELHLDDA RKRFAMTIEL AVLD
|
|---|
| |