| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1881 |
|---|
| Symbol | |
|---|
| ID | 4973205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 1958774 |
|---|
| End bp | 1959934 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640456089 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001133149 |
|---|
| Protein GI | 145222471 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0940618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCT TCATCGAAAC CGAGGAACAA CAGGCGCTGC GCAGTGCGGT CGCCGCCATG
GTCGCCGGAT ACGGGCAGGA CTACTACCTT GAGAAGTCCC GGGCCGGCGA GCACACCGAC
GAACTCTGGT CGGAGGCAGG CAAGTTGGGC TTCATCGGGG TGAACCTGCC CGAGGAGTAC
GGCGGCGGCG GCGCGGGCAT GTACGAGCTG AGCCTGGTGA TGGAGGAGAT GGCCGCCGGC
GGCGCGTCGC TGCTGATGAT GGTGGTCTCC CCCGCGATCA ACGGCACCAT CATCGCCAAG
TTCGGCACCG AGGAGCAGAA GAAGCGCTGG CTGCCCGGTA TCGCCGACGG CACCCTGACG
ATGGCGTTCG CGATCACCGA ACCCGATGCG GGCTCGAACT CGCACAGGAT CACCACGACG
GCCCGCCGCG ACGGCAGCGA CTGGATCCTG TCCGGACAGA AGGTCTACAT CTCCGGGGTC
GACCAGGCGC AGGCGGTCCT TATCGTGGGC CGGACCGAAG ATCACAAGAC CGGGAACCTG
AAGCCGGCGT TGTTCGTCGT CCCGACAGAC ACACCGGGTC TGACGTACAC CAAGATCCCG
ATGGAGATCG TGAGCCCGGA GTTCCAGTTC CAGGTCTTCC TCGACGAGGT CCGGCTGCCC
GCCGACGCGC TCGTCGGATC CGAGGACGCC GCCATCGCCC AGCTGTTCGC CGGGCTCAAT
CCGGAGCGGA TCATGGGGGC GGCCAGTGCA GTCGGGATGG GCCGCTTCGC GCTTGCCAAA
GCCGTCGAGT ACGTCAAGGG CAGGCAGGTG TGGAAGACAC CCATCGGCGC GCATCAGGGT
CTCTCACACC CGTTGGCGCA GAACCACATC GAGGTCGAAC TCGCCAAACT CATGATGCAG
AAGGCCGCGG CGCTGTATGA CGCCGGCGCT GACGAGGCGG CCGCCGAAGC CGCCAACATG
GCCAAGTACG CCGCCGGTGA GGCGTCCGTG CGCGCTGTGG ATCAGGCGGT GCAGTCACTC
GGCGGCAACG GTCTGACCAA GGAGTACGGC GTCGCAGCGA TGCTGACAGC ATCGCGGCTG
GCCCGGATCG CGCCGGTCAG CCGGGAGATG ATCCTGAACT TCGTGGCGCA GACGTCGCTG
GGCCTCCCCC GGTCCTACTG A
|
|---|
| Protein sequence | MSGFIETEEQ QALRSAVAAM VAGYGQDYYL EKSRAGEHTD ELWSEAGKLG FIGVNLPEEY
GGGGAGMYEL SLVMEEMAAG GASLLMMVVS PAINGTIIAK FGTEEQKKRW LPGIADGTLT
MAFAITEPDA GSNSHRITTT ARRDGSDWIL SGQKVYISGV DQAQAVLIVG RTEDHKTGNL
KPALFVVPTD TPGLTYTKIP MEIVSPEFQF QVFLDEVRLP ADALVGSEDA AIAQLFAGLN
PERIMGAASA VGMGRFALAK AVEYVKGRQV WKTPIGAHQG LSHPLAQNHI EVELAKLMMQ
KAAALYDAGA DEAAAEAANM AKYAAGEASV RAVDQAVQSL GGNGLTKEYG VAAMLTASRL
ARIAPVSREM ILNFVAQTSL GLPRSY
|
|---|
| |