Gene Mflv_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1776 
Symbol 
ID4973100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1845827 
End bp1846615 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID640455983 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001133044 
Protein GI145222366 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.869283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGG AACAGTTCCA GCTCGACGGT CAGGTTGCCA TTGTCACCGG CGCGGGCAAG 
GGCGTCGGGC AGGGCATCGC ACGTGTGCTC GCGGAGGCCG GCGCAACCGT GATCGGCACG
GCCAGAACGG AATCCGACAT CGTCTCGACC ATCGACGGTA TCGAGGCAGC GGGAGGGCGC
GGCGTCGCGG TGGTCGCCGA CGCGATGAGC AGACCGGACG GGGAACGGGT CGTCGGCACC
GCCATGGACC GGTTCGGCCG AATCGACATC CTGATCAACA ACGTCGGTGG CTCCACCTAC
GCCCGGTTCC TCGACATCAC CGACGAGGAC TTCCGGCACA CGTTCGACTG GTGCGTCACC
TCGGCGTTCA TCATGAGCCA GCTGGCGGCG CCGCACATGA TCGATGCGGG ACGCGGCTCG
ATCGTCAACA TCTCCTCGGG CTCTGCCCGA TTCGGCATCC GGGCGCTGAC CGCGTACTGC
GTGGCCAAGG GCGGACTCGA AGCGCTGACC CGTGCGATGG CCCAGGAACT GGCCCCGAAG
ATCCGCGTGA ACGCGATCGC GCTGGGATCT TTCGCGACCG AAGGGTTACA AGGAAGCCTT
GACTTGTTAC CCGGGTCGCT GGAGAAGATG AAAGAGGCGA CGCCGTTGCA TCGCCTGGGC
GACGTCGAGG ACCTCGGGAG GTTGTGCGTG TATCTGTCCA CGCGCGACTG CTATGCCACC
AACGCGATCT TTCACGTGGA CGGCGGCATC GACTCCAACA ACTCGCCGCT GCCCATCCCC
GACTACTGA
 
Protein sequence
MALEQFQLDG QVAIVTGAGK GVGQGIARVL AEAGATVIGT ARTESDIVST IDGIEAAGGR 
GVAVVADAMS RPDGERVVGT AMDRFGRIDI LINNVGGSTY ARFLDITDED FRHTFDWCVT
SAFIMSQLAA PHMIDAGRGS IVNISSGSAR FGIRALTAYC VAKGGLEALT RAMAQELAPK
IRVNAIALGS FATEGLQGSL DLLPGSLEKM KEATPLHRLG DVEDLGRLCV YLSTRDCYAT
NAIFHVDGGI DSNNSPLPIP DY