Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1560 |
Symbol | |
ID | 4972886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 1631352 |
End bp | 1632512 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640455764 |
Product | virulence factor Mce family protein |
Protein accession | YP_001132830 |
Protein GI | 145222152 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTC GCGTACTCGG GGTGTCGTCG GTCGCGCTGC TGCTGAGCGG CTGCCAGTTC GGTGGTCTGA ACTCGCTGAA CATGCCCGGC ACCGCCGGAC ACGGCAGCGG CTCCTTCGAT GTCAGCGTCC AGTTGCCCGA CGTGTCCACA CTGCCGCAGA ACTCGCCGGT GATGGTCGAC GACGTCACCG TGGGCAGTGT GTCCGGTGTG GAGGCGGTGC AGCGCGAGGA CGGCACCTTC TTCGCCGAGG TCCAGCTCTC CCTCGACGGA AACGTGAAGC TACCGGCCAA CGCGACGGCC AAGGTCGCCC AGACCTCGTT GCTCGGCTCG CAGCACATCG AGTTGGCCCC GCCCGCAGAC GGATCGGGAA CAGGCGAGTT GGTGGAGGGT TCGCGGATCC CGATCGACAA CACGGCCAAC TACCCGACGA CCGAGCAGGT GCTGTCCTCG CTCGGCGTGG TGGTCAACAA GGGTAATCTC GGTGCGCTGC AGGACATCAC CGACGAGACC TACAACGCCG TGGTGGGGCG TTCCGGCACG TTCGAGGGCC TGATTCCCCG GCTTGCCGAG CTGACCGACT CGCTGGACCG GCAGACCGGT GACATCATCG CCGCGGCCGA GGGCCTGAAC AGGTTCGCCG GGATTCTGGC CGGCAGCAAG GACAGCCTGG GCCGCACGCT CGACACGCTG CCCGAGGCGC TGGAGGTGCT CAACGACAAC CGGGCGCAAC TCGTCGATGC GTTCACCGCG CTGCGCAGCT TCGCCGAGGT CGCATCGCGG GTCCTGCAGG AGACCAAGGA CGACTTCGCC GCGGACTTCA AGGACCTGTT CCCGGTCATC AAGGCGCTCA ACGACAACGC GGACTACTTC ATCAAGGACC TCGAGTTCCT GCCGACGTTC CCGTTCCACT ACAAGTACCT GCGCAACGCG GTGCGCGGTG ACTACCTGAA CGTGTACACG ACGTTCGACC TGACTTTGCG CCGCGTCGGT GAATCGGTGT TCACGACGTC GCTGGGACTG GACCCGAACA TGAAGCGGAT GAACGAGATC GTCAATCCGC CCGACTTCCT CACCGGCGCG ATGGCGAACC TGTCGGGTCA GGCGGCGGAT CCGTTCAAGA TTCCGCCGGG CACCGCGACG CAACACGAGG GGGCGCCGTA A
|
Protein sequence | MIRRVLGVSS VALLLSGCQF GGLNSLNMPG TAGHGSGSFD VSVQLPDVST LPQNSPVMVD DVTVGSVSGV EAVQREDGTF FAEVQLSLDG NVKLPANATA KVAQTSLLGS QHIELAPPAD GSGTGELVEG SRIPIDNTAN YPTTEQVLSS LGVVVNKGNL GALQDITDET YNAVVGRSGT FEGLIPRLAE LTDSLDRQTG DIIAAAEGLN RFAGILAGSK DSLGRTLDTL PEALEVLNDN RAQLVDAFTA LRSFAEVASR VLQETKDDFA ADFKDLFPVI KALNDNADYF IKDLEFLPTF PFHYKYLRNA VRGDYLNVYT TFDLTLRRVG ESVFTTSLGL DPNMKRMNEI VNPPDFLTGA MANLSGQAAD PFKIPPGTAT QHEGAP
|
| |