Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1559 |
Symbol | |
ID | 4972885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 1629976 |
End bp | 1631355 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640455763 |
Product | virulence factor Mce family protein |
Protein accession | YP_001132829 |
Protein GI | 145222151 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGG AGAACTCGGT GACACGCAGC CGCTGGTTAC GGCCGGTGCT GATCTGTGTG CTCGTCGCCG TCCTGGCGAT CGGCGCGTAC CTGGTGTGGC CGAGCCGCAC CGGGCAGAAG GTGACGGCGT ACTTCACGTC CGCGGTGGGT CTGTACCCCG GCGACGACGT GCGCGTGGTC GGTGTGCCGG TCGGCACGAT CGACGCAATC GATCCCCGCG CCAACGACGT GAAGATCACG ATGACGATCG ACAGCGACGT GAAGCTGCCC GCGGAGGCCA AGGCGCTGGT GATCTCGCCG AACCTGGTGT CGGCCAGGTT CATTCAGCTG ACCCCCGCCT ACACCGGTGG CGCCGTGCTG GCCGACGGTG CCGAGATCGG GCTCGACCGC ACCGCAGTTC CGGTCGAATG GGACGAGGTC AAAGAGCAAC TGACGCAGCT GAGCACCCAA CTCGGGCCGA ACGAGGACTC GGTGCGGGGG CCGCTGACCG ACGTCGTGAA CCAGGCCGCC GACACCTTCG ACGGCAACGG TGACACCTTC CGCAGTGCGG TGCGCGAGCT TTCGCAGACC GCGGGGCGCC TCGGGGATTC GCGGGCCGAC CTGTTCGGCA CGATCCGCAA CCTGCAGATC CTCGTCGACG CTCTGTCACG CAGCAACGAG CAGATCGTGC AGTTCTCCAA TCACGTCGCG TCGGTTTCCC AGGTACTCGC CGACGCCACC ACCGATCTCG ACATCACACT GGGCACGCTG AACCAGGCGC TCACCGACGT GCGCGGCTTC CTGGGGGAGA GCAACGAGGC GCTGATCGGA CAGGTCAACC GTCTCACCGA CTTCACGAAC CTGCTGACCG AGCACAGTGA CGACATCGAA CAGATCCTGC ACATCACGCC CAACGGGCTG AGCAACTTCT ACAACATCTA CAACCCGGCG CAGGGCACCG TCGGCGGGCT GCTGACTCTG CCGAACTTCG CCAACCCGGT GCAGTTCATC TGCGGCGGCA CGTTCGACGC CGCCGCCACC CCCGACAACT ACAAGCGCGC CGAGATCTGC CGTCAGCGGA TGGGCCCGGT GTTCAAGCGC ATCACGATGA ACTATCCGCC GCTGCTGTTC CATCCGATCA ACAGCATCAC GGCCTACAAG GGGCAGATCA TCTACGACAC CCCCGCCACC GAGGCCAAGG CCGAGACGCC GGTTCCGTAC CTGCAGTGGC AGAACGCCCC GGGCGTGACG CCGCCCAAGG TCGCACCTGA TGCGGACCTG ACGTCGCTGC TGGTTCCCGC CGAGGGCGCC GAGGCGTCCA CCTCGCACGC GGGTGGCCCC GAGACGGGGC CGGCGCCCGC CGCACCCGCT GCGCCCGGAC CGGCGGAGGC GGGCCGATGA
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Protein sequence | MTQENSVTRS RWLRPVLICV LVAVLAIGAY LVWPSRTGQK VTAYFTSAVG LYPGDDVRVV GVPVGTIDAI DPRANDVKIT MTIDSDVKLP AEAKALVISP NLVSARFIQL TPAYTGGAVL ADGAEIGLDR TAVPVEWDEV KEQLTQLSTQ LGPNEDSVRG PLTDVVNQAA DTFDGNGDTF RSAVRELSQT AGRLGDSRAD LFGTIRNLQI LVDALSRSNE QIVQFSNHVA SVSQVLADAT TDLDITLGTL NQALTDVRGF LGESNEALIG QVNRLTDFTN LLTEHSDDIE QILHITPNGL SNFYNIYNPA QGTVGGLLTL PNFANPVQFI CGGTFDAAAT PDNYKRAEIC RQRMGPVFKR ITMNYPPLLF HPINSITAYK GQIIYDTPAT EAKAETPVPY LQWQNAPGVT PPKVAPDADL TSLLVPAEGA EASTSHAGGP ETGPAPAAPA APGPAEAGR
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