Gene Mflv_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1458 
Symbol 
ID4972784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1519389 
End bp1520159 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID640455662 
ProductHAD family hydrolase 
Protein accessionYP_001132728 
Protein GI145222050 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.450575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAC TGCTGCCCGA GCTCGAGTCC GCGCTCTCCG CCGCGGCGCG CACCCCCCGC 
CTGCTCGTCG CGTCCGACTT CGACGGCACC CTCGCACCGA TCGTCAACAA CCCCGCCGAT
GCGCGTCCGC TCCCCGGGGC CGCCGAGGCG CTGATCGCCC TCGCCACACT GCCGTCGACT
GCCGCGGCGC TCATCTCCGG TCGGGCCCTG GCGACACTGC GCGAACTCTC GTCGATGCCC
GACTCGGTGC ACCTGGTGGG CAGCCACGGC GCAGAGTTCG AGTCCGGGTT CTCCCGCGAC
ATCGACCGCG ACCTTCTGCA GACGATCACC GACGGCCTCG ACGCCATCGC CGCCGGCAGG
CCGGGGGTCG CCGTCGAGAC GAAACCCGCG TCCGTCGCGC TGCACGTCCG CAACGCGTCA
CCCGCCGACG GCGACGCCGC CCTGGCCGCC GCATGGGATG CGGCTCGCGA CTGGGACGCC
CACATCACGA CCGGTAAGGC CGTCCTCGAG TTCGCCGTGA TCAGCACCGA CAAGGGCGAA
GCGGTCGACA TCCTGCGCGA GCGCCTCCAG GCCACGACAG TGGTGTTCCT CGGCGACGAC
GTCACCGACG AGAAAGCCTT TGTGCGCCTT GGTGAATCCG ACGTCGGCGT GAAGGTGGGT
CCCGGTGACA CGGCGGCCGC CTACCGGGTC GAGTCCCCCG CCGACGTCGC GACGGCGCTG
CGCCACCTCG TCGACACACG CGCGGCCCAG TCCCCGCAAC CGGCGCCCTA G
 
Protein sequence
MSALLPELES ALSAAARTPR LLVASDFDGT LAPIVNNPAD ARPLPGAAEA LIALATLPST 
AAALISGRAL ATLRELSSMP DSVHLVGSHG AEFESGFSRD IDRDLLQTIT DGLDAIAAGR
PGVAVETKPA SVALHVRNAS PADGDAALAA AWDAARDWDA HITTGKAVLE FAVISTDKGE
AVDILRERLQ ATTVVFLGDD VTDEKAFVRL GESDVGVKVG PGDTAAAYRV ESPADVATAL
RHLVDTRAAQ SPQPAP