Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1333 |
Symbol | |
ID | 4972659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 1386891 |
End bp | 1387733 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640455535 |
Product | RDD domain-containing protein |
Protein accession | YP_001132603 |
Protein GI | 145221925 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.391018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGCC AGCAGCAACC CGTGGTAACC GGCGACGCGG TCGTCCTCGA CATCCAGATC GCCCAGCTCC CGGTGCGGGC CTTGTCTGCG CTGATCGACG TTTCGGTGGT CGCGTTGGTC TACATCATCG GGGTGATCCT GTGGGCGATG ACGCTGTCGC AGTTCGACCC GGCGTTCTCG GGCGCGGTGC TGATCATCTT CACGGTGCTC GCGCTGGTCG GGTATCCGGC GATCTTCGAG ACGGCGACCC GCGGCAGGAC GCTCGGGAAG ATGGCGCTCG GCCTGCGGGT GGTGTCCGAC GACGGTAGCC CCGAACGCTT CCGGCAGGCG CTCTTCCGTG CGCTGGCGGG CGTGATCGAG ATCTGGATGC TCACGGGTGG CCCGGCCGTG CTGTGCAGCC TGGTGTCCAG CAAGGGCAAA CGCATCGGTG ACATCTTCGC CGGCACCGTC GTCATCAGTG AGCGTGCGCC GCGACAGGCG CCGCCACCGG CGATGCCACC GCAGCTGGCG TGGTGGGCTT CGAGCCTGCA GCTGTCGGGG CTGGCTCCGT CGCAGGCCGA GATGGCCCGT CAATTCCTCG CGCGCGCAGG GCAGTTGGAT CCGCACATCC GCGATCAGAT GGCCTACCGC GTCACCTCGG ACGTGGTGGC GCAGATCTCG CCACCCCCGC CGCCGGGGGT GCCGCCGGCG CTGGTGCTCG CGGCGGTGCT CGCCGAACGC CACCGCCGCG AGCTGGCCCG GTTACAGCAC CCGGCGCCGG GACCCGGGTG GTCCGCGGCG CCGCCGACGT CCCCGCCGCC TCCTCCACCG GCCGCCGGTG GCGGGTTCAC ACCACCGTCC TGA
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Protein sequence | MVGQQQPVVT GDAVVLDIQI AQLPVRALSA LIDVSVVALV YIIGVILWAM TLSQFDPAFS GAVLIIFTVL ALVGYPAIFE TATRGRTLGK MALGLRVVSD DGSPERFRQA LFRALAGVIE IWMLTGGPAV LCSLVSSKGK RIGDIFAGTV VISERAPRQA PPPAMPPQLA WWASSLQLSG LAPSQAEMAR QFLARAGQLD PHIRDQMAYR VTSDVVAQIS PPPPPGVPPA LVLAAVLAER HRRELARLQH PAPGPGWSAA PPTSPPPPPP AAGGGFTPPS
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