Gene Mflv_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1295 
Symbol 
ID4972621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1348705 
End bp1349373 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID640455497 
ProductXRE family transcriptional regulator 
Protein accessionYP_001132565 
Protein GI145221887 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.419553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAACC AGAACGACCG TGACGATCAC ACCCCGCTGC TGCGCAACAC CTCGGGCACC 
GCGCGGGACC GCGATCCGGG CGCGCCGGTC GAAGAACTCG AGATCGAGTC GGCGATCGGG
CGCAACGTGC GGCTCCTGCG CCAGCAGCAG GGCCTCACGG TCGCCGAGAC GGCCGCCCGC
GTCGGCATCT CCAAGGCGAT GATGAGCAAG ATCGAGAACG CCCAGACCTC CTGCAGCCTG
TCGACGCTGG CGCTGCTCGC CAAAGGCTTC GACGTACCGG TCACGAGCCT GTTCCGCGGC
GCCGACGTGG AACGCCCCGC GGCGTTCGTC AAAGCGGGCA CCGGGGCCCG GATCGTGCGC
GAGGGCACCA GGGAGGGCCA CGAGTACCAG TTGCTGGGTT CGCTGCGCGG CGAGCACAAG
CGGCTGGAGT GCCTCGAGGT CACGCTGTCG GAGAAGAGCC AGACCTACCC GCTGTTCCAG
CATCCGGGCA CCGAGTTCAT CTACATGCTC GAGGGCGTGA TGGATTACAG CCACAGCCGC
TCGGTCTATC GCCTGCAGCC CGGAGATTCG CTGCAGATCG ACGGCGAGGG CGCGCACGGA
CCCGTCGATC TGGTGGAGGT CCCGATCCGG TTTCTGTCGG TTATCGCTTT CCCCGACTCA
CAGGTTTGA
 
Protein sequence
MANQNDRDDH TPLLRNTSGT ARDRDPGAPV EELEIESAIG RNVRLLRQQQ GLTVAETAAR 
VGISKAMMSK IENAQTSCSL STLALLAKGF DVPVTSLFRG ADVERPAAFV KAGTGARIVR
EGTREGHEYQ LLGSLRGEHK RLECLEVTLS EKSQTYPLFQ HPGTEFIYML EGVMDYSHSR
SVYRLQPGDS LQIDGEGAHG PVDLVEVPIR FLSVIAFPDS QV