| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0858 |
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| Symbol | |
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| ID | 4972186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 892210 |
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| End bp | 894006 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640455056 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001132130 |
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| Protein GI | 145221452 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0229896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGCA CGCGGGTACT GCGCCCCACC GTGAAGACCT TTGCACTTGC GCTGATCATC
GGGATGGTCA CGGCGATGGG CCTGGCCGCG CCGGCCGGCG CCCAGACCGA CCAGTGCTCG
CCGCCGGGCG AGCAGAGCGC CAGCGCCCTA CCGACGAACC TGGCGGCCGC CGCCACCGGC
CCCGCGGCCG ACAAGTACAC CACCGCGACG GTCACGCCAC TGGACGCCGT CGACGTCGAC
GCGTTGGGTC TCAGCGAACC GGGAACGCTG ACCGTCGGCA CCCTGTCAGA CGCGCCGCCG
AGCATCTGCA TCGACTCCTC CGGACAGTTC ACCGGATTCG ACAACGAGCT GCTGCGCGCG
GTCGCCGACC GGCTCGGCCT GCGCATCAAC TTCGTCGGCA CCGAGTTCTC CGGACTGCTG
GCCCAGGTCG CGTCGCGTCG CTTCGACGTG GGCTCCTCGT CGATCACCAC CACCGACGCC
CGCCGTCAGA CCGTCGGGTT CACCAACGGC TACGACTTCG GCTACTTCTC CCTCGTCGTC
CCCAAGGGCT CACCGATCAC CGGCTTCGAC GAGCTCGTCG CCGGTCAGCG CATCGGCGTC
GTCCAGGGCA CGGTGCAGGA GGCCTATGTC ATCGACACCC TGAAGTTGCA GCCGGTGAAG
TTCCCCGACT ACAACACCGT CTACGCGAGC CTCAAGACCG GGCAGATCGA CGCATGGGTG
TCGCCGTCGC AGCAGGCGCA GGGCACCGTC CAGCCGGCCG ACCCGGTCGA AATCATCGAG
AACACCTTCA GCCTCGACAA CTTCATCGCC TGGGCGGTCG CCAGTGACAA CCAGCCGCTG
ATCGACGCGC TCAACTCCGG GCTGGACGCC GTCATCGCCG ACGGCACCTG GTCTCGCCTC
TACTCCGACT GGGTGCCGCG CGCCCTGCCG CCGGGATGGA AACCCGGGTC CAAGACCGCG
CCGACACCGG TGCTTCCCGA CTTCACCGCG ATCGCCGCGC AGAACCAGGA CACCGGAGCG
CCCGTCGCGC CCGCCGAGCC CAAATCGACG CTCTCCCAGC TCGCGGCGTC GTTTCTGGAC
TGGGATCTCT ACAAGCAGGC GATCCCCGAC CTGTTCAAGA CCGGACTGCC CAACACCCTG
ATCCTGACGA TCTGCGCCAG CATCATCGGA CTGATCCTCG GCATGGCGCT GGCCATCGCC
GGCATCTCGA AGTCACGGTG GCTGCGCTGG CCCGCCCGCG TCTACACCGA CATCTTCCGC
GGCCTGCCCG AAGTCGTGAT CATCCTGCTG ATCGGCCTCG GAGTCGGGCC CGTCGTCGGG
CACCTCACCA ACAACAATCC GTTCCCGCTG GGCATCGCCG CGCTCGGACT GATGGCGGCC
GCCTACGTCG GCGAGATCTT CCGCTCCGGC ATCCAGAGCG TCGACCCCGG ACAGCTCGAA
GCATCCCGCG CACTCGGCTT CAGCTATTCG ACGTCGATGC GGCTGGTGGT CGTCCCGCAG
GGCGTGAGAC GGGTGCTGCC GGCGCTGATG AACCAGTTCA TCTCGCTGCT GAAGGCCTCG
TCGCTGGTGT ACTTCCTCGG GCTGATCGCC AACCAACGCG AGCTGTTCCA GGTCGGCCGG
GATCTCAACG CCCAGACCGG AAACCTGTCA CCGCTGGTGG CGGCCGGCCT GTTCTACCTG
GCCCTGACCA TCCCGCTGAC GCACCTGGTG AACTACATCG ACGTGCGGCT GCGCCGGGGC
CGCCGACCCG ACGAGAAGGA CCCGCTGGTG CTCGCGACCT CGCAGGAGAT GAACTGA
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| Protein sequence | MSCTRVLRPT VKTFALALII GMVTAMGLAA PAGAQTDQCS PPGEQSASAL PTNLAAAATG
PAADKYTTAT VTPLDAVDVD ALGLSEPGTL TVGTLSDAPP SICIDSSGQF TGFDNELLRA
VADRLGLRIN FVGTEFSGLL AQVASRRFDV GSSSITTTDA RRQTVGFTNG YDFGYFSLVV
PKGSPITGFD ELVAGQRIGV VQGTVQEAYV IDTLKLQPVK FPDYNTVYAS LKTGQIDAWV
SPSQQAQGTV QPADPVEIIE NTFSLDNFIA WAVASDNQPL IDALNSGLDA VIADGTWSRL
YSDWVPRALP PGWKPGSKTA PTPVLPDFTA IAAQNQDTGA PVAPAEPKST LSQLAASFLD
WDLYKQAIPD LFKTGLPNTL ILTICASIIG LILGMALAIA GISKSRWLRW PARVYTDIFR
GLPEVVIILL IGLGVGPVVG HLTNNNPFPL GIAALGLMAA AYVGEIFRSG IQSVDPGQLE
ASRALGFSYS TSMRLVVVPQ GVRRVLPALM NQFISLLKAS SLVYFLGLIA NQRELFQVGR
DLNAQTGNLS PLVAAGLFYL ALTIPLTHLV NYIDVRLRRG RRPDEKDPLV LATSQEMN
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