Gene Mflv_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0837 
Symbol 
ID4972165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp866934 
End bp868121 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID640455035 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_001132109 
Protein GI145221431 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase
[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.265707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.357261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTC TGCGTCGCGG TGACCGCGGG GGTGCGGTCG CCGAGATCAG AGCCGCTCTC 
GCGGCGCTCG GCATGGCCAC CGACCCCGAC GAGGATCTGA GCACCGGCAA GCACGTCGCC
GCAGATCTGT TCGACGACGA ACTCGACCAT GCGGTCCGCG CATTCCAGCA GCACCGCGGG
CTTCTCGTCG ACGGAATCGT CGGTGAGGCC ACCTACCGCG CACTCAAGGA AGCTTCCTAC
CGACTCGGGG CGCGCACCCT CAACCACCAG TTCGGCGCAC CGATGTACGG CGACGATGTC
GCGACACTTC AAGCCCGGCT GCAGGATCTC GGTTTCTACA CCGGTCTGGT CGACGGTCAT
TTCGGGCTGC AGACCCACAA CGCGCTGTCC TCGTATCAGC GGGAGTACGG CCTCTACCCC
GACGGCATCT GCGGCCCGGA GACGTTGCGC TCCTTGTACT TTCTCGGGGC TCGCGTCACC
GGCGGTTCGC CGCACGCGAT CCGGGAGGAG GAACTCGTCC GCAGCTCCGG ACCGCGCCTG
TCGGGCAAGC GCATCATCGT CGACCCGGGT CGTGGAGGCT CCGATCACGG CGTGATCGTC
AACGGACCCG ACGGACCAAT CAGCGAAGCG GACATCTTGT GGGACTTGGC AAGTCGCCTC
GAGGGTCGCA TGACGGCGAT CGGCATCGAG ACGTTCCTGT CGCGATCGGC GAACTCGTCC
CCCACCGATG CCGAGCGCGC GGCCACCGCC AACACGGTGG GCGCCGACAT GATGATCAGC
CTGCGGTGCG CCACCCAGGA CAGTCCGGCG CCCAACGGTG TCGCCTCGTT CCACTTCGGT
AATTCCCACG GTTCGGTGTC CACCATCGGA CGCAACCTCG CCGACTTCAT CCAGCGAGAG
GTCGTGGCGC GAACCGGATT ACGTGACTGC CGGGTGCACG GCCGCACCTG GGATCTGCTC
CGGCTCACCC GTATGCCCAC CGTGCAGGTC GACGTCGGGT ACATCAGCAA CCCGGGTGAC
AGGGCCACGC TGGTCTCCCC CGAATCCCGG GACGCGCTCG CCGAGGGCAT CCTCGCCGCG
GTCAAACGCC TGTACCTGCT CGGCAAGAAC GACCGTCCCA CAGGCACTTT CACGTTCGCC
GAGCTGTTGG CTCACGAACT GTCGGTGGAG CAGGCACGCC GCGGCTAG
 
Protein sequence
MSSLRRGDRG GAVAEIRAAL AALGMATDPD EDLSTGKHVA ADLFDDELDH AVRAFQQHRG 
LLVDGIVGEA TYRALKEASY RLGARTLNHQ FGAPMYGDDV ATLQARLQDL GFYTGLVDGH
FGLQTHNALS SYQREYGLYP DGICGPETLR SLYFLGARVT GGSPHAIREE ELVRSSGPRL
SGKRIIVDPG RGGSDHGVIV NGPDGPISEA DILWDLASRL EGRMTAIGIE TFLSRSANSS
PTDAERAATA NTVGADMMIS LRCATQDSPA PNGVASFHFG NSHGSVSTIG RNLADFIQRE
VVARTGLRDC RVHGRTWDLL RLTRMPTVQV DVGYISNPGD RATLVSPESR DALAEGILAA
VKRLYLLGKN DRPTGTFTFA ELLAHELSVE QARRG