Gene Mflv_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0566 
Symbol 
ID4971902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp594931 
End bp595713 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID640454769 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001131846 
Protein GI145221168 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.639731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGG GGGACCGCCG GGTCGCAATT GTCACTGCCG CCGCCGCGGG AATCGGTAAG 
GCGATCGCCC TGCGGTGGTG CCGCGAAGGT GGGTGCTGTG TCATGGCCGA CACCGACGGC
GAGGGCCTCG ATGCGGCCGT GCATGAATTG GCCGAGTCCG GCGCGGCGGT TTGCGGCGTC
GCCGGCGACG TTTGCCTCAG CGATGTTGCC AACAGTGTCG TCGAACGGGC GCTGACCGAG
TTCGGGCGGC TCGACACACT GTTCAACGTC GTCGGCGGGA GCCTGGCTCG CAACGTGGAG
GAGATCAGCG AGGAGCAGTG GCGCAGCCAG ATCGACATGA ACCTCGGCAG TGTCTTTCAG
ATGTCCAAAC CCGTCATCCC ACTCCTGCGC CAGGGTGGCG GCGGGTCGAT CGTCAACGTC
GCGTCGACGG CCGGGATCCT CGCCGAGAAC AGGTGCTCCG CCTACAGCGC AAGCAAAGGC
GGGGTCGTGC TGCTCACGAA GAACATGGCC CTCGACTTCG CCCGCGACAA CATCCGCGTG
AACGCGATCG CCCCCGGGGG CACCCGCACG CCGAGGATCG AACGGTTCCT GGCCGAGCAC
CCCGAACACG CCTCGATGAT GGTGGACCTC TGCGCGATGC AGCGTTTCGC AGGACCAGAC
GAGATCGCGG CGCCGGCTGT GTTTCTTGCC TCGCCCGAGG CGTCCTACAT CACCGGTGCC
GTACTGCCGG TCGACGGAGG CATGACCGCC GGCGTCACTT TCCGGGCGTT CGAGGCGGTA
TGA
 
Protein sequence
MTAGDRRVAI VTAAAAGIGK AIALRWCREG GCCVMADTDG EGLDAAVHEL AESGAAVCGV 
AGDVCLSDVA NSVVERALTE FGRLDTLFNV VGGSLARNVE EISEEQWRSQ IDMNLGSVFQ
MSKPVIPLLR QGGGGSIVNV ASTAGILAEN RCSAYSASKG GVVLLTKNMA LDFARDNIRV
NAIAPGGTRT PRIERFLAEH PEHASMMVDL CAMQRFAGPD EIAAPAVFLA SPEASYITGA
VLPVDGGMTA GVTFRAFEAV