Gene Mflv_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0380 
Symbol 
ID4971456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp380523 
End bp381665 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID640454585 
Productbifunctional uroporphyrinogen-III synthetase/response regulator domain protein 
Protein accessionYP_001131662 
Protein GI145220984 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00848915 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGATC CGGACTGGGC GCCGCTCACC GGATTCCGCG TCGCCGTCAC CTCCGCGCGG 
CGCGCCGACG AGCTGGCCGC GCTGCTGCGG CGCCGCGGCG CGACGGTGAC CAGCGCCGCC
GCGATCGAGA TGGTGCCCCT TCCCGACGAC GACGAATTGC GTCAACGCAC GCAGTCGCTC
ATCGACGCAC CCCCCGACAT CGTGATCGCG ACGACCGGGA TCGGGTTCCG CGGCTGGGTG
GCCGCAGCCG ACGGGTGGGG CATGGCCGCC GATCTGACGA CGGCGCTGAG CACGGCCCGC
ATCGTGTCGC GGGGCCCGAA AGCCACCGGT GCACTGCGCG CCGCCGGCCT GCCCGAGGAA
TGGTCGCCGG AATCCGAGTC GTCCCGCGAG CTGCTGCACT ACCTGGTCGA GGGCGGTATC
GCCGGAACCC GAATCGCGGT GCAGCTGCAC GGAGCGACCG CGGAATGGGA TCCGTTCCCC
GAGTTCCTCG ACGAATTACG TGCTGCCGGA GCAGAAGTGG TCCCGATCCG GGTGTACCGC
TGGCATCCGG CCCCCCGCAA CGGGGACTTC GACCAGTTGG TCGCCGGGAT CGCCGAGGAG
AAGTTCGACG CGGTCAGCTT CACCTCGGCC CCCGCGGTCG CGTCGGTGCT CCTGCGCGCG
ACCGAGATGG GCCTGGAGGC CGAGGTGCTG TCGGCGCTGC GCAACGGCGT GCACGCGATG
TGCGTCGGGC CCGTCACCGC ACGGCCGCTC GTGCGGCTCG GGGTGCCGAC ATCGGCGCCG
GAGAGGATGC GGTTGGGCGC GCTGGCCCGG CACATCACCG ACGAGCTCCC GCTGCTGCAG
GCGCGGACGG TGCGGGTCGC CGGGCACCTG CTGGAGATCC GCGGCACCTG CGTGCTGGTC
GACGGCACGG TCAAGGCGCT GTCGCCGGCC GCGATGGCGA CGATCCGGGC GCTGGCGCTC
AAGCCCGGCG CGGTGGTGTC ACGCACCGAC CTGCTGCGCG CCCTGCCGGG CAGTGGCACC
GACACCCACG CCGTCGAGAC CGCGGTGCTT CGGCTACGCG CCGCGCTGGG GGACAAGAAG
ATGGTGTCGA CTGTGGTCAA GCGCGGCTAC CGGCTGCCCG TCGACGAGGC GTTCGCGTCA
TGA
 
Protein sequence
MTDPDWAPLT GFRVAVTSAR RADELAALLR RRGATVTSAA AIEMVPLPDD DELRQRTQSL 
IDAPPDIVIA TTGIGFRGWV AAADGWGMAA DLTTALSTAR IVSRGPKATG ALRAAGLPEE
WSPESESSRE LLHYLVEGGI AGTRIAVQLH GATAEWDPFP EFLDELRAAG AEVVPIRVYR
WHPAPRNGDF DQLVAGIAEE KFDAVSFTSA PAVASVLLRA TEMGLEAEVL SALRNGVHAM
CVGPVTARPL VRLGVPTSAP ERMRLGALAR HITDELPLLQ ARTVRVAGHL LEIRGTCVLV
DGTVKALSPA AMATIRALAL KPGAVVSRTD LLRALPGSGT DTHAVETAVL RLRAALGDKK
MVSTVVKRGY RLPVDEAFAS