Gene Mflv_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0295 
Symbol 
ID4971371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp291301 
End bp292170 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID640454500 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001131577 
Protein GI145220899 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.312268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0519409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG TTCTTCTGAT TTCGGGTGCT TCCCGCGGTC TGGGTCGTGC TATCACCGAG 
TCCGCCTTGG CAGCAGGACA TCTCGTGGTA GCCGGGGTTC GCGCGACCTC GTCGCTGAGC
GACCTCGCAA CACGCGAACC CGACCGCCTT GCTGTGGTGG AACTCGACGT GACCGACGAC
CGGCACGCCC GCGCGGCGGT GGCGACCGCC GTCGAGCGCT TCGGGCGCCT CGACGTCCTG
GTCAACAACG CCGGCTACGC CAACATGAGT GCGATCGAGG ACGTCGACGT CGACGACTTC
CGCGCCCAGA TAGAGACGAA CTTCTTCGGC GTGGTGAATC TGACCCGGGC AGCGCTGCCG
GCGATGCGTC GTCAACGCGA CGGGCACATC GTCCAAATCT CCTCGGTCGG TGGGCGTCTG
GTACGTCCCG GTCTGGCCGC CTACCAGTCG GCCAAGTGGG CGGTGACCGG GTTCTCCGGC
GTCCTCGCCG TGGAGGTTGC TCCGCTCGGT ATCAAGGTTA CGGTTCTGGA ACCCGGCGGC
ATGCGTACCG ACTGGGCGGG TTCGTCCATG CGTATCGCAC CCGTGCGCGA GGAGTACGCC
GCGACCGTCG GGGCCGCTGC TTCGCTCAGC GACCCGAATG TGTTGGGGGC CAGCGATCCG
GCCAAGGTGG CCGGCCTGCT GCTCGACGTG ATCGGCATGC CCGACCCACC GAGAAGACTG
CTCGTGGGTC CCGACGCGTA CCGGTATGCG ACCGCCGCAG GACGGGACCT GCTTGCCGTC
GACGAGAGGT GGCGGACACT CAGCATGTCC ACCGCCGCCG ACGATGTCTC ACCAGAGCAA
CTCGATCCGC TCGGATCGGC GTCCCGCTGA
 
Protein sequence
MSKVLLISGA SRGLGRAITE SALAAGHLVV AGVRATSSLS DLATREPDRL AVVELDVTDD 
RHARAAVATA VERFGRLDVL VNNAGYANMS AIEDVDVDDF RAQIETNFFG VVNLTRAALP
AMRRQRDGHI VQISSVGGRL VRPGLAAYQS AKWAVTGFSG VLAVEVAPLG IKVTVLEPGG
MRTDWAGSSM RIAPVREEYA ATVGAAASLS DPNVLGASDP AKVAGLLLDV IGMPDPPRRL
LVGPDAYRYA TAAGRDLLAV DERWRTLSMS TAADDVSPEQ LDPLGSASR