Gene Mflv_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0279 
Symbol 
ID4971355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp272421 
End bp273689 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content67% 
IMG OID640454483 
Productaminotransferase AlaT 
Protein accessionYP_001131561 
Protein GI145220883 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.306917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.798305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC ACCAGGCGCA CTGGCAGGCA GGCACTGGCC AGCACGCGCG TCAGCGCGAG 
TTCGCGCAGT CCAGCAAGCT GCAGGACGTC CTGTACGAGA TCCGTGGGCC CGTGCACGAG
CACGCCTCGC GGCTGGAGGC CGAGGGCCAC CGGATCCTGA AGCTCAACAT CGGCAACCCC
GCCCCGTTCG GCTTCGAGGC CCCCGATGTG ATCATGCGCG ACATCATCGC CGCGCTCCCC
TACGCGCAGG GCTACTCCGA CTCCAAGGGC ATCGTCAGCG CCCGCCGCGC GGTGTTCACC
CGCTACGAGC TCGTCGAGGG CTTCCCGCGC TTCGACATCG ACGATGTGTT CCTCGGCAAC
GGTGTCTCCG AGCTGATCCA GATGACGCTG CAGGCGCTGC TGGACAACGG CGACCAGGTG
CTGATCCCGG CACCGGACTA TCCGCTGTGG ACCGCGTGCA CCTCGCTGGC CGGGGGCACC
CCGGTGCACT ATCTGTGCGA CGAGACGCAG GGCTGGAACC CCGACGTCGC CGACATCGAG
TCGAAGATCA CCGACCGCAC CAAGGCGATC GTGGTGATCA ACCCGAACAA CCCGACCGGC
GCGGTCTACA GCCGCGAGGT CCTCACCCAG ATCGCGGACC TGGCGCGCAA GCACCAGCTG
CTGCTGCTGG CCGACGAGAT CTACGACAAG ATCCTCTACG ACGACGCCGA GCACATCTCG
CTGGCCTCGG TGGCGCCCGA CCTGCTGACG TTGACGTTCA ACGGGCTGTC CAAGGCCTAC
CGGGTGGCCG GGTACCGCTC CGGGTGGCTG GTGATCACCG GGCCCAAGGA ACACGCCGCC
AGTTTCATCG AGGGCATCAG CCTGCTGGCC AACATGCGGC TGTGCCCGAA TGTCCCTGCC
CAGCATGCGA TTCAGGTGGC ACTCGGTGGC CATCAGAGCA TCGACGACCT GGTTCTGCCC
GGTGGCCGCC TCCTCGAGCA GCGTGACATC GCGTGGGAGA CACTCAACGA GATCCCCGGG
GTGTCGTGCG TCAAACCCCA GGGTGCGCTG TATGCGTTCC CGCGCCTGGA CCCCGAGGTC
TACGACATCG CCGACGACGA GCAACTGGTC CTCGACCTGC TCCTGCAGGA GAAGATCCTG
GTGGTCCAGG GCACCGGATT CAACTGGCCC ACACCGGATC ACCTGCGCAT CGTGACGTTG
CCGTGGGCCC GCGACCTGTC AGCGGCCATC GAGCGGCTCG GCAACTTCCT CGTCAGCTAC
CGGCAGTAA
 
Protein sequence
MSTHQAHWQA GTGQHARQRE FAQSSKLQDV LYEIRGPVHE HASRLEAEGH RILKLNIGNP 
APFGFEAPDV IMRDIIAALP YAQGYSDSKG IVSARRAVFT RYELVEGFPR FDIDDVFLGN
GVSELIQMTL QALLDNGDQV LIPAPDYPLW TACTSLAGGT PVHYLCDETQ GWNPDVADIE
SKITDRTKAI VVINPNNPTG AVYSREVLTQ IADLARKHQL LLLADEIYDK ILYDDAEHIS
LASVAPDLLT LTFNGLSKAY RVAGYRSGWL VITGPKEHAA SFIEGISLLA NMRLCPNVPA
QHAIQVALGG HQSIDDLVLP GGRLLEQRDI AWETLNEIPG VSCVKPQGAL YAFPRLDPEV
YDIADDEQLV LDLLLQEKIL VVQGTGFNWP TPDHLRIVTL PWARDLSAAI ERLGNFLVSY
RQ