Gene Mflv_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0006 
Symbol 
ID4971629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4710 
End bp5951 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content69% 
IMG OID640454212 
Producthypothetical protein 
Protein accessionYP_001131290 
Protein GI145220612 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.805588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAC GCCGAGCGGC TACGGCACTG GCGGTGGCGA TGACCACCTG TCTGTCGGTG 
ACCTCCTGTG CGACAGAGGG TTTGTCGAGC CTGCCGCTGC CTGCCCCCGG CGGCGGTTCG
GGCGGCTACA CGCTCACCGC CGTGTTCTCC AACGCTCTGA ACCTGCCGGC GATGGCCAAG
GTCAAACTCG CCGGCGCCGA CATCGGTCAA CTGGAATCGA TGCAGGCCCG CGACTACACG
GCGGTGACGA CCCTGCGGAT CAGGGAAGGG GTGTTGCTGC CGGTGGGCAG TACCGCCGAA
TTGCGTTCGG CGACACCGCT GGGCGACGTC TTCGTCTCCA TCAAGCCACC TCCGTCGGCA
GGGCAGGGCA CGCCGCTGCT CACCGACGGC GACACCATCG GCCTCGAGTC GACCACCGCG
GCGGCCACCG TCGAGTCCGT GCTGAGTTCG GCGGCGATCC TGGTCAACGG CGGAGCCGTC
CGCAACTTCA CCAACATCAT CAACGGTCTC GGGAAGGCCA CCGGCGACCA GGGTCAGGCG
TTCGGTGAGC TCATCCGCAA GACCAATCAC ACCCTGGGCA CCCTGAACGG CCGCTCCGAG
GAGATCAAGA CCGCGCTGAC CGAGACCTCG CAGTTGGCAG CGCAACTGGA GGCCAAGAAT
CAGTCCCTGG CCGAGGTGAT GGACGCCGCG GCGCCCGCCA CCAGTACGCT GGCCGCCCAG
ACGAACGGCA TCGCCGACCT GGTCCTGACC GTCGGCGCGA CCACCGAACA GCTCAGGAAA
TTCCCGTCGA TCGCCGGGAC CGACACCAGT GGGCGCAGCG TGATCGCGGA CGCGAGCAGG
ATCGCCGGCG CCTGGAACGA CGTCGTGCTG GCCCCGGGTG CGGATCTCTA CTCGTTGAAC
CGGTTGATGC CGCCGTTCAT CAAATCCACG ACGAGCAATG CCATCGCCGT GCGCGCCAGC
ATCGACCGCC TCGTCCTCGG CTCGATTCCC GACATCGGCT TCGCCGGCGA TCCCGGTCTG
CACGGCCCCA AACGCTACAA CTGGCACCAG TTGGTCGGCT CGTTGCGCTA CACGTTGCTG
CGGCTGCAGG AGCGGGTGGT GGGCAAGGGG CCGGGAGTGC CCCAGATGCC GGTGATCCCG
AGCCCCACCG AGCCGGGGCA GTGGGCGCCG GCACCACCCC CGGGGCCGGT ACCGCCCGGA
CCTGCGCCGG CTGTCGCGCC GCCGGCACCG GGGGTGCCGT GA
 
Protein sequence
MMTRRAATAL AVAMTTCLSV TSCATEGLSS LPLPAPGGGS GGYTLTAVFS NALNLPAMAK 
VKLAGADIGQ LESMQARDYT AVTTLRIREG VLLPVGSTAE LRSATPLGDV FVSIKPPPSA
GQGTPLLTDG DTIGLESTTA AATVESVLSS AAILVNGGAV RNFTNIINGL GKATGDQGQA
FGELIRKTNH TLGTLNGRSE EIKTALTETS QLAAQLEAKN QSLAEVMDAA APATSTLAAQ
TNGIADLVLT VGATTEQLRK FPSIAGTDTS GRSVIADASR IAGAWNDVVL APGADLYSLN
RLMPPFIKST TSNAIAVRAS IDRLVLGSIP DIGFAGDPGL HGPKRYNWHQ LVGSLRYTLL
RLQERVVGKG PGVPQMPVIP SPTEPGQWAP APPPGPVPPG PAPAVAPPAP GVP