Gene Mfla_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_2333 
Symbol 
ID4001429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp2488692 
End bp2489186 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID637939260 
Product16S rRNA processing protein RimM 
Protein accessionYP_546441 
Protein GI91776685 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000377156 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0588442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCA TCGTCGCCCC TTATGGCGTT TATGGCTGGG TCAAGGTCCA GCCGGCTACC 
GAGTATGTCG ACAGCCTGTT TGATTATGGC CGTTGGATGC TGGGGCGTGG CGATCCGAAG
CAACCTGAGC AATGGCAGTC ATGCGAGGTC GAAAAGGCCA AGGTGCATAA CGATTTGTTG
CTGGTCAAGC TCCAAGGTAT TGATGATCGC GACCAGGCAT TTTCCTGCAA GGGCATGTAT
GTTGCCGTGT ATCGGGATGA GTTGCCGGAG CCTGAAGAGG GTGAATATTA CTGGTCCGAC
CTGATCGGTC TGCAGGTACG CAACCAACAA GAGGTGGATT TCGGCCAGGT GGTCGATGTA
TTTGCTACCG GTGCCAATGA TGTCTTAGTG GTGAAGGGTG ACCGTGAGCG GTTGGTGCCG
TTTATCGGCC AGGTTGTACT GGAAGTGGAT ACCGACGGCA AGACGATGCT GGTGGATTGG
GATCCGGAGT TTTGA
 
Protein sequence
MGRIVAPYGV YGWVKVQPAT EYVDSLFDYG RWMLGRGDPK QPEQWQSCEV EKAKVHNDLL 
LVKLQGIDDR DQAFSCKGMY VAVYRDELPE PEEGEYYWSD LIGLQVRNQQ EVDFGQVVDV
FATGANDVLV VKGDRERLVP FIGQVVLEVD TDGKTMLVDW DPEF