| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2138 |
|---|
| Symbol | |
|---|
| ID | 3999947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 2285954 |
|---|
| End bp | 2286484 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637939064 |
|---|
| Product | ribosomal large subunit pseudouridine synthase E |
|---|
| Protein accession | YP_546246 |
|---|
| Protein GI | 91776490 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0137061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTT TATTCAATAA GCCTTATGGT GTAATTTGCC AGTTCAGTCC CCATGAAAAG
CACAAGACAT TGAAGGATTA TATTGCTGTG CCAGGGGTTT ATGCCGCTGG GCGGCTTGAT
ACTGACAGTG AAGGTCTGCT TATTCTAACC GATGATGGGC GACTTCAACA CCGCATATCG
CATCCCAGGC ACAAAGAATT CAAAACTTAC TGGGTGCAGG TAGAGGGCGA CCCCAGCGAT
GAAGCATTGG AGCCCCTACG GCATGGCATG GATCTGGGCG ACTTCGTTAC CCAGCCTGCT
AAAGTCAGGC GCATAGAAGA ACCAGCCGGG TTATGGCCCA GGCACCCGCC TATCCGCGAG
CGCAAGGCCA TTCCGACTGC CTGGCTGGAA GTGATCATCG CTGAGGGCAA GAATCGCCAG
GTGCGGCGGA TGACCGCTAA GGCAGGGTTC CCGACATTGC GCCTGGTGCG CTATGCGGTG
GGGCAGCATA CGCTCGAAGG CATCGCGCCA GGGGAGTGGA GGCAGCTTTA G
|
|---|
| Protein sequence | MLILFNKPYG VICQFSPHEK HKTLKDYIAV PGVYAAGRLD TDSEGLLILT DDGRLQHRIS
HPRHKEFKTY WVQVEGDPSD EALEPLRHGM DLGDFVTQPA KVRRIEEPAG LWPRHPPIRE
RKAIPTAWLE VIIAEGKNRQ VRRMTAKAGF PTLRLVRYAV GQHTLEGIAP GEWRQL
|
|---|
| |