Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_2090 |
Symbol | |
ID | 4001340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | - |
Start bp | 2237521 |
End bp | 2239272 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637939016 |
Product | Lipid A export ATP-binding/permease protein MsbA |
Protein accession | YP_546198 |
Protein GI | 91776442 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.121229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.848171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAA CTGCACTTGG GAAGGCTAAT GCCTCCGTGC AAAGTGCGCG GGCTCTTTAT CTGCGCCTCC TCAAATATGC AGCCCGTTAC TGGGTAGCAT TCCTGATCAG CATCATTGCG CTAGTGACTT TCTCAGCGAC GAATACCGGA TTTCTTGCCA CCATCAAGCT TGTTACCGAT GCAGGATTCG TCAATCAGGA CTCGACCAAG CTGCACCTGC TCCCGTTTAT GCTGTTTGGG TTGCTGGCAA TCCGGGCGCT AGCGGGGTTC ATCTCCAACT TTGCCATGCG CTGGGTGGCC CGGCGGGTGG TGGAAAACCT GCGCCAGGAT ACGTTTCGTC GCCTGATGAG TTTGCCCGTC AGTTTCTTTG ATGCTGTGTC GGCTGGCGTC GTGACTTCCA AGCTGACCTA TGACACAGAG CAGATGGCGG GTGCCGCGAC TAAGGTGGCC ATGAGTGCCG TGCGTGATAC GCTGACTATT CTTGGTATGG TGGGGTACAT GCTGTATCTG GATTGGCAGC TGACCCTGAT TTTCGCGGTC GTGGCTCCTG CCATGGCATG GTACCTCAAG AGCATGACAC CAAAGTTACG TAGTTCGGGC AAGGCTGTGC AGCAGACCAT GGGGGAAATG ACCAAGGTCA TCGAGGAAGC TGTGTCCGGT CAACGGATGG TGAAAATTTT TGGCGGCGGT GATTACGAGT ACCAGCGCTT CACCAAAGTG GCAGGCAAGA ATCGCCATAT GCAAATACGC CTGGCGCGGT TTTCTGGCTT GAACAGCATG GTGGTCGAGT TGCTGGCGGG CGTGGCTTTG GCGCTGGTGG TATTTTATGC AGTGGGGAAA TTTAGCGCCG GCGAGTTTGC AGCTTTCATC GGTGCTTTGC TGATGCTGAT TGGACCAGTG AAGACATTGA CCAGTTTGAA TGAGGAGCTG CAGGTGGGGT TGGCAGCCGC TCATAGTGTG TTTGAGCTGA TTGACAGCAT CCCGGAAGTC GATGAGGGAC ATGAGGAGAT CGGTCGCGCC GAGGGTAGCA TTGTGTTTGA GAATGTGACA CTGCAATATC CTTCCGCCCA ACGTCCTGCC TTGCTTGATC TCAATTTCAC AGTCAAGCCG GGTGAGAAAA TTGCTTTGGT CGGCCGCTCC GGCGGCGGCA AGACCACCTT GGTCAACCTG CTGCCACGCT TCTATGAGGT GCAGCAGGGA CGTGTGCTGA TCGATGGTGT AGACGTTCGG AACATGAGCC TGAAAAGCTT GCGTCAGCAA TTTTCCTTGG TCAGCCAGGA TGTGATTCTC TTCAACGATA CTGTGTTCAA CAATATTGCT TATGGTGTGC TACGCAACGC CAGTGAGGAG GACGTGATTG CTGCTGCCAA GGCGGCGCAT GCCTGGGATT TCATTCAGCA ATTGCCCAAC GGTCTGCAAA GCGAGATCGG TGATCGAGGC GTACGCTTGT CCGGCGGGCA GCGCCAGCGT CTGGCCATTG CGCGTGCGAT CCTCAAGAAT GCTCCCATTC TGTTATTGGA TGAAGCGACA TCTGCACTGG ACACGGAGTC CGAGCGCCAT GTGCAGGCAG CGCTGGACGA GTTGATGCAG AACCGAACCT CAATTGTGAT TGCCCATAGA CTGTCGACCA TAGAAAACGC GGATCGCATT ATGGTGATGG AGCAGGGGAG GATTATCGAA GGAGGAAGCC ATGAGGAATT GCTGGCTCTG GATGGACATT ACGCCAAGCT TTATCGTAAA CAATTTCACT AG
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Protein sequence | MSKTALGKAN ASVQSARALY LRLLKYAARY WVAFLISIIA LVTFSATNTG FLATIKLVTD AGFVNQDSTK LHLLPFMLFG LLAIRALAGF ISNFAMRWVA RRVVENLRQD TFRRLMSLPV SFFDAVSAGV VTSKLTYDTE QMAGAATKVA MSAVRDTLTI LGMVGYMLYL DWQLTLIFAV VAPAMAWYLK SMTPKLRSSG KAVQQTMGEM TKVIEEAVSG QRMVKIFGGG DYEYQRFTKV AGKNRHMQIR LARFSGLNSM VVELLAGVAL ALVVFYAVGK FSAGEFAAFI GALLMLIGPV KTLTSLNEEL QVGLAAAHSV FELIDSIPEV DEGHEEIGRA EGSIVFENVT LQYPSAQRPA LLDLNFTVKP GEKIALVGRS GGGKTTLVNL LPRFYEVQQG RVLIDGVDVR NMSLKSLRQQ FSLVSQDVIL FNDTVFNNIA YGVLRNASEE DVIAAAKAAH AWDFIQQLPN GLQSEIGDRG VRLSGGQRQR LAIARAILKN APILLLDEAT SALDTESERH VQAALDELMQ NRTSIVIAHR LSTIENADRI MVMEQGRIIE GGSHEELLAL DGHYAKLYRK QFH
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