Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_1842 |
Symbol | |
ID | 4000969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | - |
Start bp | 1980615 |
End bp | 1981685 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637938758 |
Product | rhomboid-like protein |
Protein accession | YP_545950 |
Protein GI | 91776194 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000517898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC TAACCGATAG CTGGCCTTCC CTAGGTGCTG CAATCAAGCA GCGCACGCCA GGCATCCCGG TGACCAAGTG CCTCATCGCG GCCAACTTGC TGGTATTTGT GCTGATGCTG TTCAATGGTG CTGGTTTCTG GCACTCCCCC AACAATGTGC AGCTGCAGCT TGCATGGGGT GCCAACTTCG GTCCTGCGAC GCAGGATGGG GAATGGTGGC GTTTGTTCAC CGCCTTGTTC TTGCATTTCG GCGCTGTGCA CCTGGCATTG AACATGATTG CATTCTGGGA TGGCGGGCAG CTCGTGGAGC GCATGTATGG CCATTGGCGC TACCTGGTCA TCTATCTGGT CAGCGGCTTG GTCGGTAACC TGCTTTCGCT GGTGTGGCAG GGCAACCAGG CGGTATCTGG TGGGGCATCT GGCGCGATTT TCGGCATTTA TGGCGCCTTG ATCGTATTTC TCTGGCAAGA ACGGGCGTTG CTAGACCGAC GCGAGTTCCG TTGGCTGTTC GGGGGCGCCT GCGTATTCGC AACCGCCACC ATTGCGCTGG GCTTCATGAT TCCCGCGATT GACAATGCCG CACATATTGG CGGCTTTGTC GCGGGCATGC TGGCTGGATT GCTGCTGATG CGCGGCTTGA GGCCGCAAGA GGTAGTGCCA CGTTTGCCCC GGCTGATCGG CGGCAGCCTG CTGGTAGCTG CTATTGCCAT CATGCTATAC AAGCTTCCAG CGCCTAAATA CAGCTGGGGC GATGAGCTGC TGCTGCAAAA GGAAATCAAT GCTTTCATTC AGGAAGATCA GGCGATCAAC CGTTCTTGGC TGCATATCAT GCATGAGAGC AAGCAGGGCA ATGTGACATA TTTTGAGCTG GGCGAGCAGA TCGAGAACGA TATCACCGAC CGCTATCAGG AACGCTATGA GGCCTTGTCG CAACTGCCCT ATGATCCTAA TCTACCGTCT GCCGCCAAGC TAGAGAACAT ACTGCAATAC ACCAAGCAGA AGCGCGATGC TTCGCGGGCT TTGGCCGAGG AGCTCAAGCA GGGCAGAAAG CCGTCTAAAC CTGCGCCCTG A
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Protein sequence | MTDLTDSWPS LGAAIKQRTP GIPVTKCLIA ANLLVFVLML FNGAGFWHSP NNVQLQLAWG ANFGPATQDG EWWRLFTALF LHFGAVHLAL NMIAFWDGGQ LVERMYGHWR YLVIYLVSGL VGNLLSLVWQ GNQAVSGGAS GAIFGIYGAL IVFLWQERAL LDRREFRWLF GGACVFATAT IALGFMIPAI DNAAHIGGFV AGMLAGLLLM RGLRPQEVVP RLPRLIGGSL LVAAIAIMLY KLPAPKYSWG DELLLQKEIN AFIQEDQAIN RSWLHIMHES KQGNVTYFEL GEQIENDITD RYQERYEALS QLPYDPNLPS AAKLENILQY TKQKRDASRA LAEELKQGRK PSKPAP
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