| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1476 |
|---|
| Symbol | |
|---|
| ID | 4000448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 1584228 |
|---|
| End bp | 1585151 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637938387 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_545585 |
|---|
| Protein GI | 91775829 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.436214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.364448 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CGCTGGTGTC TCATCCTGAT ACGCTGCTGC ATGTCATGGA TGGTCTGCAT
CCCGAGTCAC CAGCACGCAT CACGGCCATC ATGGACGCGT TGGCAGAACA CCGGTTATTA
GATAAGCTGC AGCGCCACGA GGCTCCCCAA GCCACGGATG AAGCACTGTT GCGCGTACAT
GATGCTGCCT ATATCAAGCA TATCCGCAGC ATTGCGCCTC GCGCCGGTAT CGTGAGGCTG
GACCCGGATA CCGCCATGGG GCCAATGTCA TTGTCGGCTT GCCTGCATGC TAGCGGCGCC
GTTATCAAAG CCGTTGATCT GGTCATGCAA AAGCAAGTAA CCAATGCATT CTGTTGTGTC
CGACCGCCAG GACATCATGC AGGCAGGGCG CGCGCTGCAG GCTTTTGCAT TTTCAATCAT
ATTGCAGCAG GCGTTGCTTA TGCGCTGGCC TCCTACAAAC TCAAGCGCAT TGCGGTTCTC
GATATTGATG TGCATCACGG CGATGGCACC GAGGATATCT TCCGTAACGA CCCGCGCGTC
ATGCTGTGCT CCACCTTCCA GCATCCTTTC TATCCGCACA GTGGGGCAGA TACGCGCCTG
GACCATATCG TCAATGTTCC CTTGCCTGCG GAAAGCGACG GCGCAGCATT TCGCGAAGCG
TTCCTGCTGC GCTTCGAACC CGCATTGCAG CGATTCCAGC CCCAAATGGT CTTCATCTCT
GCTGGATTTG ATGCACATGC AAACGATCCA CTGGCACAGT TGATGCTAAA AGGTGAGGAT
TACCACTGGA TCACGCAGTT CGCGATGAGA ATCGCCGAGC AACATGCAGA CAATCGCATC
GTATCCCTGC TGGAGGGCGG CTACCATCTC CCATCGCTCG CGGAATCGGC AACAATCCAT
GTCAGGACCT TGGCAGGACT TTGA
|
|---|
| Protein sequence | MSTALVSHPD TLLHVMDGLH PESPARITAI MDALAEHRLL DKLQRHEAPQ ATDEALLRVH
DAAYIKHIRS IAPRAGIVRL DPDTAMGPMS LSACLHASGA VIKAVDLVMQ KQVTNAFCCV
RPPGHHAGRA RAAGFCIFNH IAAGVAYALA SYKLKRIAVL DIDVHHGDGT EDIFRNDPRV
MLCSTFQHPF YPHSGADTRL DHIVNVPLPA ESDGAAFREA FLLRFEPALQ RFQPQMVFIS
AGFDAHANDP LAQLMLKGED YHWITQFAMR IAEQHADNRI VSLLEGGYHL PSLAESATIH
VRTLAGL
|
|---|
| |