Gene Mfla_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1360 
Symbol 
ID4000627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1450487 
End bp1453600 
Gene Length3114 bp 
Protein Length1037 aa 
Translation table11 
GC content60% 
IMG OID637938266 
Productmultidrug efflux protein 
Protein accessionYP_545469 
Protein GI91775713 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAT TTTTCATTGA ACGCCCAGTC TTCGCCTGGG TCATTTCCCT ACTGATCATC 
CTGGCGGGCC TGCTCGCGAT CCGCGGCCTG CCGGTCGCGC AATATCCGGA CATTGCGCCG
CCAGTAGTGA ACATTTCCGC CACCTATCCA GGGGCGTCCG CCAAGGTGAT CGAGGAATCG
GTCACTGCCA TCATCGAGCG CGAAATGAAC GGTGCGCCCG GCCTGATGTA TATCTCGGCC
ACCAGCAGCC CGGGCACGGC TTCGCTCAGC CTCACCTTCC GCCAGGGCAC CAACCCGGAT
CTGGCGGCGG TGGAAGTGCA GAACCGCTTA AAGACGGTGG AGGCGCGCCT GCCGGAAGTC
GTACGCCGCA ACGGTATCTT CATCGAGAAA TCCGCAGACA GCATCCAATT GATTGTTTCC
CTCACCTCCG AAGGCAATCG CCTGACCGAG ATCGAGCTGG GCGAGCTGGC CGCAGCCAAC
GTACTGCAGG CATTACGGCG CGTCGAGGGC GTGGGCAAGG TGCAGATATG GAGCCCGGAA
TACGCTATGC GTATCTGGCC CGACCCCGCC AAACTGACTG CAATGAACCT CAGCGCTTCC
GATGTCGCCT CTGCAATCCG TAGCCACAAT GCCCGTGTCA CGGTTGGCGA CTTGGGCAAC
CGGGCGGTGC CAGACCACGC ACCCATCAGC GCCAATGTCA TTTCCGACAG CGCCCTGACA
ACGCCGGAAG ACTTCGAGCG CATTCCGCTG CGTACCAGGG CCGACGGCTC GGCCATCCTG
CTCAAAGACG TCGCGCGGGT AGAATTCGGT GGCAGTGATT ACGCGTTCGT GTCGCGCGTG
AACGGCAATA ACGCTGCCGG CATGGCCGTC AAAATGGCGC CGGGCTCGAA CGCCGTCGCC
ACCGTCAAGC GCATTCGCGC CACCATGGAT GAGCTCGTGC GCTATCTGCC GGCTGGCGTC
AGTTACCAGA TTCCCTATGA CACTTCCGCT TTTGTCGAGA TTTCCATCGA GAAAGTCGTG
CATACCCTAT TGGAAGCCAT CGTGCTGGTG TTCCTGGTGA TGTTCCTGTT CATGCAAAAC
CTGCGCGCCA CGCTGATTCC CACCATCGTC GTGCCCATCG CCCTGCTTGG CACGTTTGCC
GTGATGCTCG CGGCTGGCTT CTCGATCAAT GTGTTGAGCA TGTTCGGCAT GGTGCTGGCC
ATCGGCATCG TGGTCGATGA TGCCATTGTC GTCGTAGAGA ACGTCGAACG CATCATGGCA
GAAGAAGGCC TGCCGCCGTT GCAGGCCACG ATCAAGGCCA TGAAGCAGAT CAGCGGCGCG
ATCATCGGCA TCACCGTCGT GCTGATTTCC GTTTTCGTGC CCATGGCGTT CTTCAGCGGC
GCGGTCGGCA ACATCTACCG CCAGTTCTCG ATGTCGCTTG CCGTATCGAT TGCCTTTTCC
GCTTTTCTCG CACTTTCGCT CACGCCTGCC CTGTGCGCTA CACTGCTCAA GCCTATTATC
CAGGACCACC ATGAAAAGCG CGGTTTCTTC GGCTGGTTCA ACCGGATGTT TGCAGCCTTG
ACCGGCCGCT ACCAGCAGCG CGTCGGTGCC ATCATCAAGC GTCCCATCAG GTGGCTGGTG
GTATATGGCA CCATCATCGC TGTGGTCGTA TTCATGTTCG TGCGATTGCC CACAGCCTTC
CTGCCCGATG AGGACCAGGG CGACTTCATG ATTACCGTGC TGCTGCCGGC CGGTGCCACC
ATGCATGAAA CCATGGGCAC ACTGGCACAC ATCGCACATT ACCTGAATGA GAACGAGCCG
GTGAAATACG TCTACGAGGT CGGCGGTTTC AGCTTCTATG GCACCGGCTC CAACAGCGGC
ATGATCTTCG CCACCCTCAA GGACTGGAAG GAACGCGAGG ATGCCGGGCA GCATGTCAAG
GCGATTGTAG ACCGCGTCAA TATGCAATTC ATGGGGCTGA AAAACACCAC GGTATTCGCG
GTCAACACCC CACCACTTCC CGAGCTGGGC TCCTCCAACG GGTTCGACCT GCGGCTGCAG
GATCGTGGCT CGGCAGGCTA CCAGGCATTC CTTGCCGCCA AGGACCAGCT CATGAGCGAA
GGCATGAAAA GCCCGGTACT GACCAACCTC ATTTTTGCAG GCTTACCCGA GGCCGCCCTG
GTGAACCTCG ACATAGACCG CCGCAAGGCC GAGGCACTGG GCGTAGGCAT GGATGAGATC
AATATCACGC TGGCCTCCAT GTTCGGCTCC GACTACATCG GCGACTTCAT GCACGGCAAC
CAGGTTCGCC GCGTCATCAT GCAGGCGGAC GGCAAGGACA GGCTGGAACT GGAGGATATC
CGCAAGCTCA GGGTGCGCAG CAGCAATGGC AGCATGGTGC CTTTATCTTC GATCGTGCAA
CTGGAATGGA TTTCCGGCCC GCCACAGCTC ACGCGCTACA ACGGCTACCC GTCCTTCACC
ATCAACGGCA ATGCCGCCCC CGGCTACAGC AGCGGCGAGG CCATGCAAGC GATTGAAGGC
ATTGCCCGCA GCTTGCCCCG CACCATTGGC TACGACTGGT CAGGCCAATC CCTGGAAGAA
CGCCGCTCGG GCGCACAGGC ACCCATGCTG TTCGGCTTGT CCGTGCTGAT CGTCTTCCTG
GCACTGGCAG CGCTATATGA AAGTTGGCTG ATTCCCCTGG CCGTGATCCT GGTGGTGCCC
TTGGGCATAC TCGGTGCATT GCTGGGCGTG ACCTTGCGCG ACATGCCCAA TGATATCTAC
TTCAAGGTCG GCCTGATCGC CACCATCGGC CTTTCCGCCA AGAATGCAAT CCTGATCGTG
GAAGTCGCCA AGGACCTCTA TGCCGACGGC ATGGGACTCA TGGAAGCGAC ACTGGAAGCT
GCCCGCCTGC GACTGCGCCC CATCGTCATG ACATCCCTGG CTTTCGGCGT GGGCGTATTG
CCGCTGGCCA TTGCCACAGG CGCCGCCTCC GGCGCCCAGT CGGCAATCGG CACCAGCGTG
CTGGGCGGCA TCATCACTGC AACCCTGCTC GCCATCTTCC TCGTCCCCTT GTTTTTCGCC
GTGATCGGTC GCTATATCAA GCGACCGCAA CACCATACGC GGGAGTCTGC ATGA
 
Protein sequence
MARFFIERPV FAWVISLLII LAGLLAIRGL PVAQYPDIAP PVVNISATYP GASAKVIEES 
VTAIIEREMN GAPGLMYISA TSSPGTASLS LTFRQGTNPD LAAVEVQNRL KTVEARLPEV
VRRNGIFIEK SADSIQLIVS LTSEGNRLTE IELGELAAAN VLQALRRVEG VGKVQIWSPE
YAMRIWPDPA KLTAMNLSAS DVASAIRSHN ARVTVGDLGN RAVPDHAPIS ANVISDSALT
TPEDFERIPL RTRADGSAIL LKDVARVEFG GSDYAFVSRV NGNNAAGMAV KMAPGSNAVA
TVKRIRATMD ELVRYLPAGV SYQIPYDTSA FVEISIEKVV HTLLEAIVLV FLVMFLFMQN
LRATLIPTIV VPIALLGTFA VMLAAGFSIN VLSMFGMVLA IGIVVDDAIV VVENVERIMA
EEGLPPLQAT IKAMKQISGA IIGITVVLIS VFVPMAFFSG AVGNIYRQFS MSLAVSIAFS
AFLALSLTPA LCATLLKPII QDHHEKRGFF GWFNRMFAAL TGRYQQRVGA IIKRPIRWLV
VYGTIIAVVV FMFVRLPTAF LPDEDQGDFM ITVLLPAGAT MHETMGTLAH IAHYLNENEP
VKYVYEVGGF SFYGTGSNSG MIFATLKDWK EREDAGQHVK AIVDRVNMQF MGLKNTTVFA
VNTPPLPELG SSNGFDLRLQ DRGSAGYQAF LAAKDQLMSE GMKSPVLTNL IFAGLPEAAL
VNLDIDRRKA EALGVGMDEI NITLASMFGS DYIGDFMHGN QVRRVIMQAD GKDRLELEDI
RKLRVRSSNG SMVPLSSIVQ LEWISGPPQL TRYNGYPSFT INGNAAPGYS SGEAMQAIEG
IARSLPRTIG YDWSGQSLEE RRSGAQAPML FGLSVLIVFL ALAALYESWL IPLAVILVVP
LGILGALLGV TLRDMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLYADG MGLMEATLEA
ARLRLRPIVM TSLAFGVGVL PLAIATGAAS GAQSAIGTSV LGGIITATLL AIFLVPLFFA
VIGRYIKRPQ HHTRESA