Gene Mfla_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0923 
Symbol 
ID4000566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp971896 
End bp972594 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID637937823 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_545032 
Protein GI91775276 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.881435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.442892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CAAAGATCAT TGTCGCCCTT GATTACCCTG ATGCTGCACA CGCCCTGGGG 
CTAGCCCGCC AGCTTGATCC AGCATTGTGC CGGGTCAAGG TAGGGAAGGA ATTGTTCACC
GCTGCTGGTC CGCAGCTAGT GGAGGCATTA ATCAAGCTCG GCTTTGGCGT GTTCCTAGAC
CTCAAGTTTC ACGACATCCC CAATACGGTC GCCAAGGCTT GCGAAGCAGC AAGCAAGCTG
GGCGTATGGA TGCTCAATGT GCATGCTTCT GGCGGTAGCC AGATGATGCA GGCTGCACGC
GAGGGCGTAG CGCGGAGTGG CCACGCTCCA TTGCTAATTG CAGTGACGGT ATTGACCAGC
ATGAACCAGG AGGAGCTGTC CGAGCTGGGA GTGAATGCCC CGATCGAGCA GCATGTATTA
CACTTGGCAA GACTCAGCCA GCAGGCAGGC CTGGATGGTG TCGTCTGTTC TGCCCAGGAG
GCTCCAGCAC TGCGCCGGGC ACTGGGTCAT GATTTTTGCC TGGTGACGCC TGGTATCCGC
CCTGCGGACG CCGCGCTCGA CGACCAATCC CGCGTGGTGA CGCCCGCCAG GGCGCTTGCC
ATGGGCTCCA ACTACCTGGT GATGGGCCGT CCCATCACCA GGGCAGCCGA CCCACTAGCC
ACACTGGATC AAATTCGGGA ATCAATCCTA GGAAAATAA
 
Protein sequence
MTDPKIIVAL DYPDAAHALG LARQLDPALC RVKVGKELFT AAGPQLVEAL IKLGFGVFLD 
LKFHDIPNTV AKACEAASKL GVWMLNVHAS GGSQMMQAAR EGVARSGHAP LLIAVTVLTS
MNQEELSELG VNAPIEQHVL HLARLSQQAG LDGVVCSAQE APALRRALGH DFCLVTPGIR
PADAALDDQS RVVTPARALA MGSNYLVMGR PITRAADPLA TLDQIRESIL GK