Gene Mfla_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0503 
Symbol 
ID3999562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp521337 
End bp522509 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content54% 
IMG OID637937400 
Productsecretion protein HlyD 
Protein accessionYP_544614 
Protein GI91774858 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCA ATTCCGTAAT AAAACCGTAT TCCACATTGA CGGCAAGTAC TCTGCTGGTT 
CTGGCATTGC TGCTTGCCGC ATGCAGCAAG CCTGCAGAAA CGTCCAATCA AGCTGTCGAG
GAGCCCAGGG ATCCGAATAT TGTCGAGCTT TCCGAAGATT TGCAACGACA TGTCAAGATT
GTACCGGTTG GCAAGGCAGA AATCAGGGAG GTGCTGCGTG TGCCTGGCAG TATCCAGGCG
GATGACCAGC GTGTCGCGCG TATTGGTGCC TCTGTCACTG GCCGCATTAC TGATATCAAG
GCCGTCTTGG GGCAAGACGT TAAACAAGGA GATGTGCTGG CTATCCTGAA CAGTACCGAG
CTTGCGCAAA GCCAGCTGCT CTACATTAAG GCGGCGCAAA GGATAGACCT GTTGACGAAG
GCCGTGGAGC GTGCGCGCTT ACTGCTTGAG GCCGATGTGA TCGGGGCAGC CGAATTGCAG
CGCCGCGAAG CGGAGTTGAG TGCGGCACAG GCTGACTTGT ACACCGCCAA GGAGCAGTTG
CAGGTACTCG GTATGTCCGA GAAGTCCATC GCCCAAATCG CCAGTTCTGG GCAATTACGC
TCATACAGCA ATGTGGATGC CCGTATATCA GGTACGGTGA TCAGCCGCAA GGTCAATCTA
GGGCAGGTAG TGCAGCCGGC TGAGGAGTTG TTCATCGTGG CCGACCTTTC TCATGTCTGG
GCTGTGGCCG AGGTGCCTGA GCAGCAGGTG GAGTTGGTGC AGGAGGGAGA AGATGTTGAT
ATCGAGGTGC CTGCACTGAG CAACCGAAAA TTCACCGGCA AGCTGATTTT TGTCGGCGAT
GTTGTCAATC CCGTGACGCG GACGGTGACG GTGCGTACTG AGCTCGAAAA TCGTGATGAG
GCGCTCAAGC CGGATATGCT GGTCTCTATG TTGGTGCAGT CCAAACCTAC CGAACAAATC
GCGGTGCCAA GACCTGCTGT GGTGCGGGAA AATGATAAAG ATCATGTATT TGTGCAGATT
GCACCGAACA AATTCCGGTT GCGTGAGGTT GTGCTGGGAA CTGCATATGG GGAAATGGTG
GCGGTTCAGA CAGGCTTAGA TGAGGGAGAG TTGATCATTA GCGATGGTGC TTTCCACATT
AATAATGAGC GTAAGCGCAA GGAACTGGAA TAA
 
Protein sequence
MFINSVIKPY STLTASTLLV LALLLAACSK PAETSNQAVE EPRDPNIVEL SEDLQRHVKI 
VPVGKAEIRE VLRVPGSIQA DDQRVARIGA SVTGRITDIK AVLGQDVKQG DVLAILNSTE
LAQSQLLYIK AAQRIDLLTK AVERARLLLE ADVIGAAELQ RREAELSAAQ ADLYTAKEQL
QVLGMSEKSI AQIASSGQLR SYSNVDARIS GTVISRKVNL GQVVQPAEEL FIVADLSHVW
AVAEVPEQQV ELVQEGEDVD IEVPALSNRK FTGKLIFVGD VVNPVTRTVT VRTELENRDE
ALKPDMLVSM LVQSKPTEQI AVPRPAVVRE NDKDHVFVQI APNKFRLREV VLGTAYGEMV
AVQTGLDEGE LIISDGAFHI NNERKRKELE