| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfl548 |
|---|
| Symbol | |
|---|
| ID | 2898013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mesoplasma florum L1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006055 |
|---|
| Strand | - |
|---|
| Start bp | 641228 |
|---|
| End bp | 641983 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637520611 |
|---|
| Product | 23S rRNA pseudouridine synthase |
|---|
| Protein accession | YP_053790 |
|---|
| Protein GI | 50365365 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 92 |
|---|
| Plasmid unclonability p-value | 0.00558647 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAT TACAGAAAAT AATTTCAGCT AGGGGTGTTA CTTCAAGAAG AAACGCTGAA
AAATTAATAG TTGAGGGAAA AGTTAAAGTA AATGGTGTAG TTATCACTGA ACTTGGTTTT
AAAACAAGTA CTGATGCTGA TATTGAAGTT AACGGTAAAC AAACAACTAA GAACAATGAA
AAGTTTTATT ATTTATTTAA TAAACCAAGA CTTGTTTTAA CAACAATGTA TGATCCTAAA
CAACGTAAAA CAGTTGCAGA TTATTTTAAA GACGTACCAA CTAGAGTTTA TCCTGTTGGA
AGACTTGATT ATGATGTTAG TGGCTTAATT ATAATGACTA ATGATGGTGA ATTTGCAAAT
TTTGTTATGC ACCCAAGATA TGAATTCTTT AAAACTTATC AAGGTTTATG TAAAGGTAAA
GTTTCAAAAC AACAAGTTAA CCAATTACTT AAAGGTGTAA AAATTGAAGA TGATTACTTT
ACAAAAGCAA TTCAGGCAGA ATTATTAAAT TATGATCAAG AAAAAGATCA ATCAATTATT
GAAATGACAA TTGCAGAAGG TAAAAAACAC CACGTTAAAC AAATGTTTTC AGCTATTGAA
GCTAACTTAA TGAAATTAAA AAGAACTAAA ATTGAATTTT TGGAAGTTGA TGATTTAGAA
GTTGGAAGAT ATAGAGAATT AAAACCTCAT GAGGTTAAAA AATTCTATGG AATTTATCAA
TCAACAAAAA GAAAAGAAGA CTTAAAAATT AAATAA
|
|---|
| Protein sequence | MERLQKIISA RGVTSRRNAE KLIVEGKVKV NGVVITELGF KTSTDADIEV NGKQTTKNNE
KFYYLFNKPR LVLTTMYDPK QRKTVADYFK DVPTRVYPVG RLDYDVSGLI IMTNDGEFAN
FVMHPRYEFF KTYQGLCKGK VSKQQVNQLL KGVKIEDDYF TKAIQAELLN YDQEKDQSII
EMTIAEGKKH HVKQMFSAIE ANLMKLKRTK IEFLEVDDLE VGRYRELKPH EVKKFYGIYQ
STKRKEDLKI K
|
|---|
| |