| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_R0039 |
|---|
| Symbol | |
|---|
| ID | 5833187 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1530431 |
|---|
| End bp | 1533255 |
|---|
| Gene Length | 2825 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 641367167 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00438131 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATCAAGTGCC TTAAGAGCAT TCGGTGGATG CCTTGGCGCT GAGAGGCGAT GAAGGACGTG
GTACGCTGCG ATAAGCCTTG GGGAGCTGCG AACGAGCTTT GATCCAGGGA TTTCCGAATG
GGGAAACCCA CCTTCGACCT TCTGTATGGT GGTAGCAGGC CGACGTAAGT CGGTCTGGTG
CTTCCATACA GTTGGTCAGA TGAAGGTATC AAATCCTGAA TACATAGGGG TTTGAAGCGA
ACCCGGGGAA CTGAAACATC TCAGTACCCG GAGGAAAGGA CATCAACGAG ACTCCGTTAG
TAGTGGCGAG CGAACGCGGA TCAGGCCAGT GCTCTGCTTG AGATTACCGG AACGGTCTGG
AAAGGCCGGC GCGATGGGTG ACAGCCCCGT ACGGGACGGT CGATAGCAGA GACTCGAGTA
GGGCGGGACA CGTGAAATCC TGTCTGAACA TGGGGGGACC ACCCTCCAAG CCTAAGTACT
CCTCAGCGAC CGATAGTGAA CCAGTACCGT GAGGGAAAGG TGAAAAGCAC CCCGACGAGG
GGAGTGAAAT AGCACCTGAA ACCGGATGCT TACAAACAGT AGGAGCCCAA GGTTTGTCCT
GGGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA AAGTTACGAG CAAGCTTAAG
CCGATAGGTG AAGGCGCAGC GAAAGCGAGT CTGAATAGGG CGTTCAGTTC GTGGCTTTAG
ACCCGAAACC GAGTGATCTA GCCATGTGCA GGATGAAGGT GGGGTAACAC CCACTGGAGG
TCCGAACCAG TGCCCGTTGA AAAGGTCTTG GATGACGTGT GGCTAGGGGT GAAAGGCCAA
TCAAACTCGG AAATAGCTGG TTCTCCGCGA AAGCTATTTA GGTAGCGCCT CGAGTGAATA
CCGTGCGGGG TAGAGCACTG GATGGGCTAG GGCCGCCCAC AGCGGTACCA AACCCAACCA
AACTCCGAAT ACGCACGAGT ACTGCTCGGG AGACACACGG CGGGTGCTAA CGTCCGTCGT
GGAGAGGGAA ACAACCCTGA CCGACAGCTA AGGCCCCCAA TTCGTGGCTA AGTGGGAAAG
GATGTGGGAC TCCCAAAACA ACCAGGAGGT TGGCTTAGAA GCAGCCATCC TTTAAAGAAA
GCGTAACAGC TCACTGGTCT AAATAAGGGG TCCTGCGCCG AAAATGTAAC GGGGCTCAAG
CCACGAGCCG AAGCTTCGGA TTCACTTCGC AAGAGGTGAG TGGTAGCGGA GCGTTCCCTA
GGCTGATGAA GGAAGACTCG TGAGAGCTTC TGGAGGTATG GGAAGTGCGA ATGCTGACAT
GAGTAACGAC AAAGAGTGTG AAAGACACTC TCGCCGAAAG TCCAAGGGTT CCTGCGTAAA
GTTAATCTTC GCAGGGTTAG CCGGCCCCTA AGGCGAGGCC GAAAGGCGTA GTCGATGGGA
ACGGGGCAAA TATTCCCCGG CCAGTGGATG GTGACGGATG CCGTATATCG TTCAACCTTA
TCGGATTGGT TGGGCGGTGA AGGGGTCCCA GGAAAGAGCC TCCACGTGAG ACCGTACCCG
AAACCGACAC AGGTGGACAG GTAGAGTATA CCAAGGCGCT TGAGAGAACG ATGCTGAAGG
AACTCGGCAA TTTGCCTCCG TAACTTCGGG ATAAGGAGGC CCTGTCGGTG GGCAACCATC
GGCAGGGGGC ACAGACCAGG GGGTGGCGAC TGTTTATCTA AAACACAGGG CTCTGCGAAG
TCTGTAAGAC GACGTATAGG GCCTGACGCC TGCCCGGTGC CGGAAGGTTA AGAGGAGAGG
TGAGAGCCTT GAATTGAAGC CCCGGTAAAC GGCGGCCGTA ACTATAACGG TCCTAAGGTA
GCGAAATTCC TTGTCGGGTA AGTTCCGACC TGCACGAATG GCGTAACGAT CTCCCCGCTG
TCTCCAGCAT CGGCTCAGTG AAATTGAATT CCCCGTGAAG ATGCGGGGTT CCTGCGGTCA
GACGGAAAGA CCCCGTGCAC CTTTACTGTA GCTTTGCGCT GGCCTTCGTG TCGGCATGTG
TAGGATAGGT GGTAGGCTTT GAAGTTCGGG CGCCAGCCTG GATGGAGCCA CCCTTGAAAT
ACCACCCTTG ACGACATGGT GGTCTAACCG CGCGCCCTGA TCGGGCGCCG GGACCGCGCA
TGGCAGGCAG TTTGACTGGG GCGGTCGCCT CCCAAAGCGT AACGGAGGCG TACGAAGGTG
GGCTCAGAGC GGTCGGAAAT CGCTCGTCGC GTGCAATGGC ATAAGCCCGC TTGACTGCAA
GACGTACATG TCGAGCAGAG ACGAAAGTCG GTCATAGTGA TCCGGTGGTC CCGCGTGGGT
GGGCCATCGC TCAACGGATA AAAGGTACGC CGGGGATAAC AGGCTGATGA CCCCCAAGAG
TCCATATCGA CGGGGTCGTT TGGCACCTCG ATGTCGGCTC ATCACATCCT GGGGCTGGAG
AAGGTCCCAA GGGTTCGGCT GTTCGCCGAT TAAAGTGGTA CGTGAGCTGG GTTCAGAACG
TCGTGAGACA GTTCGGTCCC TATCTGCCGT GGGTGTAAGG AGACTTGAGA GGATTTGTCC
CTAGTACGAG AGGACCGGGA TGAACGTACC TCTGGTGGAG CTGTTGTCGC GCCAGCGGCA
GTGCAGCATA GCTATGTACG GACGGGATAA CCGCTGAAGG CATCTAAGCG GGAAACCCAC
CTCAAAACGA GGTCTCCCTT GAGGGCCGTG GAAGACGACC ACGTCGATAG GCCGGGAGTG
CAAGCGCGGT AACGCGTTGA GCTGACCGGT ACTAATCGCC CGATTGGCTT GATCGCTCTC
ATGAT
|
|---|
| Protein sequence | |
|---|
| |