Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4800 |
Symbol | |
ID | 5834378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5361562 |
End bp | 5363046 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641370597 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001642239 |
Protein GI | 163854196 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.136917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCG TAGAAGGCCG GCCCACCACG GGGTCCCGCG CTGTCGCCGT GCTGCTCCTG GCGACGAGTT TTCTCGTCGC AGTGGCCGAC CCGGCCGAGG CAAAACGCCG AGGCCACGCC CGCAAGGCGG TGAGCGGGTA CAACCCGCCC TATGCCGCCA TGGTCGTGGA CGTGAAGTCG GGCCGCACGC TGCACGCGGT CAACGAGGAC GCGCTGCGCC ACCCCGCCTC CATCACCAAG GTGATGACCC TCTACATGCT GTTCGAGCAG TTGGAGAAGG GTCGCTACGA CCTCGACTCG CCGCTCTCGA TCTCGGCCAA CGCCGCCGCC CAGGCGCCGT CGAAGCTGGG GCTGCGCCCC GGCTCGACCG TCACGGTCGA GGAGGCCATC AAGGCGCTCG TCACCAAGTC GGCCAACGAC GTGGCCTGCG CCATCGGCGA GAACATCGCC GGCTCCGAGC CGCGCTTCGC CGAGATGATG ACGCGCAAGG CCAAGGCGAT CGGCATGAGC CGCACGCACT ACGCCAACGC GTCGGGCTTA CCCGACCCCG ACCAGATCAC CACGGCCCAC GACCTCACCC TGCTGGCCCG TGCGATCCAG GATCGCTTCC CGCGCTACTA CCGCTACTTC CAGACCCGCT CCTTCGCCTT CCGCGGCCGG ACCATCGGCA ACCACAACCG CCTGCTCGGC AATGTCGAGG GCGTGGACGG CATTAAGACC GGCTACACCC GCGATTCCGG CTTCAACCTG ATGACCGCGG CCAAGCTCGG CGACCGGCAG ATCGTCGCGA TCGTGCTCGG CGGCAAATCG GGCGCGAGCC GCGACCGGAT CATGGCCGAC CTCGTCCGCG CCAATCTGCC CCGCGCCTTC GCCGGCAGCC GTCAGACCGC GCCCGTGGTC GAGGTGGCCG AGCGCGGTCG CCCGGCAGTC GTCGCCGAAG CCGATTCCCG CACCCGGACG GTTCTCGCCT CCGCGGACGA CGAAGACATC GAGACGACGA GCTCCACCAG CAACGCTCCG CTCGACATCC GGCCGGCCAC CACTACGCCG GGATCGCGCC GCACCACCCT CCAGGCGCTG CCGGGCGCTG CCCAGGCCTA TGCCGGCTCG GCGGGTCAGG CGCCTTTCCC GGGCAGCGCC GGCAAGTCGA CCGCCCGCCT GCCCGCCGTC GAGGGCGTCG CCTCCCGGGC CGAGGGCCCG CCGAAGGATG CCCGCGGCGA CAGCGCCAAG CCGGTCACGC CGAGCCCCTG GGTGATCCAG CTCGGCGCCA TGGACGACGA GGACAAGGCC AAGTCGATCC TCGCCGACGC CCGCAGCCGC ACCGGCATGC TCTCCAAGGC CGCGCCCTAC ACGGTGCGCG TGACCCATGG CGGCACCACG CTGTTCCGCG CCCGGTTCTC GGGATTTGCC GAACAGAGCA CCGCGCAGGA TGCCTGCGCC GCGCTGAAGA AGAACGGCTT CAACTGCTTC GCGACCCGGA GCTGA
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Protein sequence | MRRVEGRPTT GSRAVAVLLL ATSFLVAVAD PAEAKRRGHA RKAVSGYNPP YAAMVVDVKS GRTLHAVNED ALRHPASITK VMTLYMLFEQ LEKGRYDLDS PLSISANAAA QAPSKLGLRP GSTVTVEEAI KALVTKSAND VACAIGENIA GSEPRFAEMM TRKAKAIGMS RTHYANASGL PDPDQITTAH DLTLLARAIQ DRFPRYYRYF QTRSFAFRGR TIGNHNRLLG NVEGVDGIKT GYTRDSGFNL MTAAKLGDRQ IVAIVLGGKS GASRDRIMAD LVRANLPRAF AGSRQTAPVV EVAERGRPAV VAEADSRTRT VLASADDEDI ETTSSTSNAP LDIRPATTTP GSRRTTLQAL PGAAQAYAGS AGQAPFPGSA GKSTARLPAV EGVASRAEGP PKDARGDSAK PVTPSPWVIQ LGAMDDEDKA KSILADARSR TGMLSKAAPY TVRVTHGGTT LFRARFSGFA EQSTAQDACA ALKKNGFNCF ATRS
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