Gene Mext_4760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4760 
Symbol 
ID5834786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5315765 
End bp5317105 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content70% 
IMG OID641370557 
Productbeta-propeller repeat-containing to-pal system protein TolB 
Protein accessionYP_001642199 
Protein GI163854156 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.577654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAA CAGCCTTCAC CCGGCGCACC CTCCTGCCGG CGCTCACGGC CGCGCTCGGC 
GTCCTCGCCC TGGCGCTGCC CGCCGCGACA CCGGCGCGGG CGCAGCTGCA GCTCCGCATC
GGCAGCGGCG CCTTCCAGCC GATGCCGATC GCCGTCGCCG ACTTCGCCGG TGACGCCAGC
CTCGGCACAT TGGTCGCCAG CGTCATCACG AACAATCTGC GCCGCTCCGG CTACTTCACG
CCTCTGGAGA AGGGGCGCTT CCCCGAGAAC CCGAGCTTCG ACGCCGCGCC GAACTTCGAG
GCGTGGAAGG GCGCGGGCGT CCAGGCGCTC GTGACCGGCC GGGTCGGGCG CGACGCCTCG
GGCCGGCTCA CCGTCGCCTT CCGCCTGTGG GACGTGGCCT CGGGCCAGCA GATCACGGGT
CAGCAATACG GCACCGACGT CGCCAATGCG CGCCGCACCG GGCATCTCGT GTCGGATGCG
GTCTACACCA AGGTCACCGG CCTCGGTCCG TGGTTCGACA GCCGCGTCGC TTTTGTCGAT
GAGTCCGGCC CGAAGGAGAA CCGCCGCAAG CGCCTGATGG TGATGGATCA GGACGGCGCC
AATGTCCGCG CGCTGACCGG GGGCGGCGAC GTCTCGGTGG TGGCGCCGCG CTACTCGCCG
GCGGGGCAGG ACATCGCCTT CATGACCCAG GCGCCGGGCC AGCAGCCCAA AGTCCAGATG
ATCGATCTGG AGACCGGCAA GCGTCAGACG GTCGGCAACT TCGCCTCGAT GAGCGCGAGC
CCGCGCTTCT CGCCGGACGG GCGCCGCCTC GTGATGAGCG TGCAGCAGGG CGGCAACGCC
GACATCGTCA CCGTCGATAT CGCCTCGAAG GCGCAGACGC CGGTCACGCA AGGTCTCGCG
ATCGACACCT CACCGAGCTA CGCGCCGGAC GGCAGCCAGA TCGTGTTCGA GTCCGACCGC
GGCGGCTCGC AGCAGATCTA CGTGATGGGC GCCGACGGCT CGAACCCGCG CCGGCTCTCC
TTCGGCGAAG GCTCGGCCTC GCAGCCGGCT TGGTCGCCCC GCGGCGACCT CATCGCCTTC
ACCCGGCAGC GCAAGGGGGG CTTTGCCATC TGCGTGATGA AGCCCGACGG CTCGGGCGAG
CGGGTGCTGA CCGAGGGCTT CCACAACGAG AGCCCGACCT TCGCGCCGAA CGGCCAGTAC
GTGATGTTCT TCCGCGATCC CGGCGGGCAG GGCGGCGGCA AGCTCTACAT GGTCGACATC
ACCGGCAAGG TGGAGCAGCC GGTGCCGACC CCGTCCTTCG CCTCGGACCC GACCTGGTCG
CCGTTGTTGT CGGGCAAGTA A
 
Protein sequence
MPGTAFTRRT LLPALTAALG VLALALPAAT PARAQLQLRI GSGAFQPMPI AVADFAGDAS 
LGTLVASVIT NNLRRSGYFT PLEKGRFPEN PSFDAAPNFE AWKGAGVQAL VTGRVGRDAS
GRLTVAFRLW DVASGQQITG QQYGTDVANA RRTGHLVSDA VYTKVTGLGP WFDSRVAFVD
ESGPKENRRK RLMVMDQDGA NVRALTGGGD VSVVAPRYSP AGQDIAFMTQ APGQQPKVQM
IDLETGKRQT VGNFASMSAS PRFSPDGRRL VMSVQQGGNA DIVTVDIASK AQTPVTQGLA
IDTSPSYAPD GSQIVFESDR GGSQQIYVMG ADGSNPRRLS FGEGSASQPA WSPRGDLIAF
TRQRKGGFAI CVMKPDGSGE RVLTEGFHNE SPTFAPNGQY VMFFRDPGGQ GGGKLYMVDI
TGKVEQPVPT PSFASDPTWS PLLSGK