Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4740 |
Symbol | |
ID | 5832896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5293400 |
End bp | 5294110 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641370537 |
Product | phosphatidylserine decarboxylase related protein |
Protein accession | YP_001642179 |
Protein GI | 163854136 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.969312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TCATCGAGAC GATCCGCCGG ACGCTCGTGC CGATCCACAA GGAGGGCTAC CCCTTCATCC TGATCGGCAT CGTGCTCACC GTGGTGCTCG GCTACTTCTC GCAGTTCTTC GGCTGGATCT TCCTGATCCT CACGCTCTGG GTCTGCTACT TCTTCCGCGA TCCCGAGCGG GTGGTGCCGG TCGGCGACGG CCTCATCGTC TCCCCCGCAG ACGGGCGCGT GAACCTGATC TCGACCGTGC TGCCGCCGGC CGAACTCGAC CTCTCGCACG AGCCGATGCT GCGGATCTCG GTGTTCATGA ACGTGTTCGA CTGCCACGTG AATCGCGTGC CGGTCTCCGG CAAGATCGGG CAGATCCACT ACACGCCGGG CCTGTTCCTC AACGCCGAGC TCGACAAGGC GAGCGAGGAC AACGAGCGCA ACGGCCTCGT CATGGAGACG ACGCATCGCG GCCAGCCGGT GCGCATCGGC GTGGTGCAGA TCGCCGGCCT CGTAGCCCGG CGCATCGTCG GCTTCGTCTC GGCCGGTGAA TCCAAGCAGG TCGGCGAGCG CTTCGGCCTC ATCCGATTCG GCTCGCGGGT CGATGTCTAC CTGCCGCTCG GCACCCGCGT GCTTGTCGGC CTCGGCCAGA AGGCGGTGGC CGGCGAGACC GTGCTGGCCG ACCTCGGTGG CGGCTCGGAG CGGGCCTTCC GCCGCATCTG A
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Protein sequence | MTDLIETIRR TLVPIHKEGY PFILIGIVLT VVLGYFSQFF GWIFLILTLW VCYFFRDPER VVPVGDGLIV SPADGRVNLI STVLPPAELD LSHEPMLRIS VFMNVFDCHV NRVPVSGKIG QIHYTPGLFL NAELDKASED NERNGLVMET THRGQPVRIG VVQIAGLVAR RIVGFVSAGE SKQVGERFGL IRFGSRVDVY LPLGTRVLVG LGQKAVAGET VLADLGGGSE RAFRRI
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