Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4726 |
Symbol | |
ID | 5832242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5279062 |
End bp | 5280246 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641370523 |
Product | major facilitator transporter |
Protein accession | YP_001642165 |
Protein GI | 163854122 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.445553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTG ATGCGGGGGG CGACCGCGCC CTTTCCCCCA CGACGCGTAT CGGGCTCACC CTGATCGCGG GTGGGGCTGT CGCCAACATC TACTACAATC AGCCTCTGCT CGCGGTCCTC GTCGCCGAGT TCGGCGAGCG GGCGGCCCTG CTCGTGCCCA CCGCCAGCCT CGTCGGCTAC GGCCTCGGCA TCCTGTTCCT CGTGCCCCTG GGCGATGCCC TGCCGCGGCG CGACCTGATC GTGTGGCAGT TGATGGGGCT CGCTGTCGCC TTGGTCGTCG CCGCGCTCAG CCCGAACCTC GCCGTGCTCG CGGGGGCCAG CCTCGTCATC GGCGTGCTCG CCTGCGCCGC GCAGCAGGCG GTGCCCTTCG CCGCCGAGCT TGCGCCCGAT GCGAGCCGGG GGCGAATCGT CGGCGGGGTC ATGACCGGCC TCCTCTCCGG CATCCTGCTC GCCCGCACCG CGAGCGGCTT CGTCGGCGCG CAGTTCGGCT GGCGCGCGGT GTTCCTCGCC GCGGCTGGCC TCGCCGTCGC CATGGCGGGG GTCGCGTGGC GCACGCTGCC GCGCAGCGCA CCGAAGCAAC GTCTGCGCTA TCGCGCGCTG ATGATCTCAC TGCTGCATCT CGTGCGCAGC CAGCCGATCT TGCGCAACGC CAGCCTGTCG CAGGCCCTGC TGTTTGCCAG CTTCAACGCG TTCTGGGCGA CGCTGGCCCT CCTCGTCGAG GCGCCGCCCT TCGACCTCAC CGCGGCGGGC GCCGGCCTGT TCGGCGTCAT CGGCGTGGCC GGCGCGCTGA TCGCCCCCTA TTCCGGCCGC TACAGCGACC GGCGCGGCGC CCGGCCGGTG GTGATCGTCG GCAGCGTCCT GGTCGCCGCG GCCTTCGCGG TGCTCGCGCT CGCCGGTGAG GTATCGCTCC TCGCCATCGC GGCAGGCGTG CTGCTCCTCG ACATCGGCAT CAACGGCGCG CTGATCGCCA ACCAGACCCG CGCTTACGCC CTCGCGCCGG GCGCCCGCGG GCGCATCAAC ACCGTGCTGT TCACCGCCGT CTTCATCGGC GGGGCGGCCG GCGCCTTCCT CGGCTCGCGC GCCTTCCTTC TCGCGGGCTG GCCCGGCGTC TGCGCCGTCG GCGGCGCCTT TGCGCTTGCC GCGCTGGCCG TGTCCTGGCT CGGCGGCAGA ACCCAGCCTA CTTGA
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Protein sequence | MSRDAGGDRA LSPTTRIGLT LIAGGAVANI YYNQPLLAVL VAEFGERAAL LVPTASLVGY GLGILFLVPL GDALPRRDLI VWQLMGLAVA LVVAALSPNL AVLAGASLVI GVLACAAQQA VPFAAELAPD ASRGRIVGGV MTGLLSGILL ARTASGFVGA QFGWRAVFLA AAGLAVAMAG VAWRTLPRSA PKQRLRYRAL MISLLHLVRS QPILRNASLS QALLFASFNA FWATLALLVE APPFDLTAAG AGLFGVIGVA GALIAPYSGR YSDRRGARPV VIVGSVLVAA AFAVLALAGE VSLLAIAAGV LLLDIGINGA LIANQTRAYA LAPGARGRIN TVLFTAVFIG GAAGAFLGSR AFLLAGWPGV CAVGGAFALA ALAVSWLGGR TQPT
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