| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4672 |
|---|
| Symbol | |
|---|
| ID | 5834433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 5223349 |
|---|
| End bp | 5224206 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641370467 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001642111 |
|---|
| Protein GI | 163854068 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA TCGTGGCCGA CGTGACCGTC GGGCCTGCCA CCTCGACCCC GGAGCGGGCG
AGCGTGCTGG CCCGGATCGA GGCCTATAAG CGCCGCGAGA TCGCCGAGGC GAAGCTGCGC
CTGCCGCTGG CCAAGCTCGA AAAGCAGGTC GCCAAGGCCG ACCCGCCCCG TGGCTTCGCC
GACGCCATCG CCCGGCATAT CGGAGAAGGC CGTCCGGCCC TGATCGCCGA GATCAAGAAG
GCCTCCCCCT CCAAGGGGCT GATCCGCGCC GATTTCGACC CGAAGACGCT GGCCAAGGCC
TACGCAAAGG GCGGCGCCAC CTGTCTCTCG GTGCTGACCG ACACGCCTTC CTTCCAGGGC
GCACCGGACT TCCTGATCGA GGCGCGGGCG GCTTGCGACC TGCCGGTCCT GCGAAAAGAC
TTCATGTTCG AGCCGTATCA AGTCTACGAG GCCCGCGCCT GGGGCGCCGA TTGCATCCTC
GTCATCATGG CCTGCCTCGA TGACGCGGAG GCCGCTGCCA TCACCGAGAC CGCCCACGAT
CTCGGCATGG ACGTGCTGGT CGAGGTCCAC GACGCGCAGG AGCTGGAGCG GGCCCTGCCC
CTCGGCACGC GGCTGGTCGG CGTCAACAAC CGCAACCTCA AGACCTTCGA GGTCTCGTTC
GAGACCGCGA TCACCCTGAA GCCCGGCATC CCCGCCGACC GGATCGCGGT GGCCGAGAGC
GGCATCGGTG GACATGCCGA CGTGCTGCGG CTGAAGCAGC ACGGGCTCAA CACCGTCCTC
GTCGGCGAGA GCCTGATGCG GCAAGACGAC GTGACCGCGG CGACACGGTC CCTGCTGTTC
GGGGAGAAGG GCCGGTGA
|
|---|
| Protein sequence | MDDIVADVTV GPATSTPERA SVLARIEAYK RREIAEAKLR LPLAKLEKQV AKADPPRGFA
DAIARHIGEG RPALIAEIKK ASPSKGLIRA DFDPKTLAKA YAKGGATCLS VLTDTPSFQG
APDFLIEARA ACDLPVLRKD FMFEPYQVYE ARAWGADCIL VIMACLDDAE AAAITETAHD
LGMDVLVEVH DAQELERALP LGTRLVGVNN RNLKTFEVSF ETAITLKPGI PADRIAVAES
GIGGHADVLR LKQHGLNTVL VGESLMRQDD VTAATRSLLF GEKGR
|
|---|
| |