Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4645 |
Symbol | |
ID | 5834844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5197430 |
End bp | 5198443 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641370440 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001642084 |
Protein GI | 163854041 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.161745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAT CCCTCGACCT CCTCGTCCTC GGCAACGCCA TCGTCGATCT CATCGCCCAT GCCGAGGAGG ATTTCCTCGT CAAGCAGGGC GTCACGAAGG GCGCGATGCA GCTCGTTGAC GAGCCGCGGG CCGAGAACCT CTTCGAGGTG ATGGGTCCGG CGACCGTCGT CTCCGGCGGC TCGGGCGCCA ACACCGCCGT CGGCGCGGCC TTGCTCGGCG CCAAGACCGG CTTCGTCGGG AAGGTGCACG AGGACGAACT CGGTCGGCTG TTCAGCCACG ACCTGAAGGC CACGGGCGTG CGCTTCGACG TACCGCCGGC GACCGAAGGG CCGACCACCG CCCGCTGCTT CATCCTGGTG ACGCCCGACG GCGAGCGCAC CATGAACACC TATCTCGGCG CCTGCCAGGG CCTCTCCCCA GACGACGTGG ACGAGGCGAC CGTGCGCTCG GCCCGCGTCA CCTATCTCGA AGGCTATCTG TGGGATCCGC CGGCCGCCAA GGACGCGTTC CGCAAGGCGG TGAAGGTCGC CCATTCGGCC GGTAACGCCG TGGCGCTGAC CCTGTCGGAC GCGTTCTGCG TCGGCCGCTA CCGTGAGGAA TTCCTCGAGC TGATCCGCAA CGGCAGCATC GACATTCTGT TCGCCAATAT CGGCGAGTTG CAGAGCCTCT ACCAGACCGA CGATCCGGAC GCCGCCGTCG CGGCCCTGCG CGAGGAGCGC GGCGGGCAGG GCACGCACCT GCTCGGCCTC GTCACCCGCT CGTCCCAGGG CGCGCTGGTG GTGCGTGGCG GTGAGGTGCG GGCGGTGGAT GCCTTCCCGG TGCGCGAGGT GATCGACACG ACCGGGGCCG GCGACCTGTT CGCGGCGGGC TTCCTCGCGG GCTACACCCG CGGCATCGAC TACGTGTCGT CGGCTCGTCT CGGCGCGCTC GCGGCGGCCG AGGTCATCGA GCATATCGGC GCCCGGCCGC AGCGCGATCT GCTGGCGCTG GCGCGCGAGC ACAAGCTCAT CTGA
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Protein sequence | MSQSLDLLVL GNAIVDLIAH AEEDFLVKQG VTKGAMQLVD EPRAENLFEV MGPATVVSGG SGANTAVGAA LLGAKTGFVG KVHEDELGRL FSHDLKATGV RFDVPPATEG PTTARCFILV TPDGERTMNT YLGACQGLSP DDVDEATVRS ARVTYLEGYL WDPPAAKDAF RKAVKVAHSA GNAVALTLSD AFCVGRYREE FLELIRNGSI DILFANIGEL QSLYQTDDPD AAVAALREER GGQGTHLLGL VTRSSQGALV VRGGEVRAVD AFPVREVIDT TGAGDLFAAG FLAGYTRGID YVSSARLGAL AAAEVIEHIG ARPQRDLLAL AREHKLI
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