| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4637 |
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| Symbol | |
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| ID | 5833439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5186587 |
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| End bp | 5188050 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641370431 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001642076 |
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| Protein GI | 163854033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.047767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG CTCCCCTCTG GACCCCCGCC GCCCTGGAAG CGGCCACCGG CGGGCGCCTG
ATCGGCGCGC CGCGCGCTGT CACCGGCGCC TCAATCGACA CCCGCAGCCT GGAACCCGGC
GACCTGTTCT TCGCCATCCG CGGCGAGGCG CGCGACGGGC ACGACTTCGT GCGCGCTGCT
CTGGACAAGG GCGCCGGCGC GGCGGTGGTC GCGGAAGTGC GCGCGAAGGA ATTCGAGGGC
GTCGGCCCGG TGCTCGCCGT GCCGGGTGAG GGCGACGATC CGGTTCTGGA CGCGATGCGT
CGCCTTGGTC TGGCCGCGCG CGCCCGCACC GGGGCAGCGA TCATCGCAGT GACGGGCTCC
GTCGGCAAGA CCGGTACCAA GGAAGCCCTG CGCCACGTGC TCTCGGCGCA AGGTGCCACG
CACGCCTCGG TCGCCTCCTA CAACAACCAT TGGGGCGTGC CGCTGACGCT GACGCGGATG
CCGGAAGACA CCCGCTTCGG CGTGTTCGAG ATCGGCATGA ACCACGGCGC CGAGATCCTC
CCGCTGACCG CGATGGTGCG GCCGGACGTG GCGCTGATCA CCACGGTCGA GCCGGTGCAT
ATCGAGCATT TCCGCTCGCT CTCGGCCATC GCCGACGCGA AGGGCGAGAT TTTTTCCGGG
CTCAAGCCCG GCGGCGTTGC GGTGATCAAC CGCGACAACC CGAACTACGA GCGCCTGCTC
GCCCACGCGC AGGCCTCGCG GGCCGGGCGG GTCATCACCT TCGGCGAGCA CGAGGCGGCG
GATGTGTGCG CCCACCGCAT CCTGACCCGG CCCGACGTCT CGGTGGTCGA TGCCACCGTG
ATGGGCGTTC CCGTGACCTA CCAGCTCGGC ACGCCGGGCC GGCACGTCGC AATGAACTCG
CTCGGCGTGC TCGCCTGCAT CCACGCGCTC GGCGCCGACC TCGCCCGCGC CGCCCTGTCG
CTGGCGAGCC TGAAGCCGCC GGTCGGGCGC GGCGAGCGCA CGGCGCTTCG GATCGGGGAC
GGCGAGGCCT TCCTCGTCGA CGAGAGCTAC AACGCCAACC CCGCCTCGAT CCGCGCGGCG
CTGGCGACGC TCGCCGGCAT CGACACCGGC GCCAAGGGCC GGCGCATCGC TGTGCTCGGC
GACATGAAGG AGCTCGGCGC GGCCGGGGAA GCGCTGCATC GCGAGTTGGC GGACGCGGTC
GCCGCGAACG GCATCGACCT CGTCTTCGCC GTCGGCCCGC TGATGGCGCA CCTGTTCGAG
GCGCTGCCGA TGACGGTGCG GGGGACGGCC GCGCCGACCG CCGAGGGCGT CACCGATGCC
GTCCTCGCGA CCCTGCGGCC GGGCGATGCC GTGATGGTCA AGGGCTCCAA CTCCATGCGC
ATGGTCCGCA TTGTCGAAGC GGTCAAAGCC CGCTACGCGG TCGCGCCGGA CCCGCGCGAA
GCCTCGCTGA ACGCGGTTCG CTAA
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| Protein sequence | MNDAPLWTPA ALEAATGGRL IGAPRAVTGA SIDTRSLEPG DLFFAIRGEA RDGHDFVRAA
LDKGAGAAVV AEVRAKEFEG VGPVLAVPGE GDDPVLDAMR RLGLAARART GAAIIAVTGS
VGKTGTKEAL RHVLSAQGAT HASVASYNNH WGVPLTLTRM PEDTRFGVFE IGMNHGAEIL
PLTAMVRPDV ALITTVEPVH IEHFRSLSAI ADAKGEIFSG LKPGGVAVIN RDNPNYERLL
AHAQASRAGR VITFGEHEAA DVCAHRILTR PDVSVVDATV MGVPVTYQLG TPGRHVAMNS
LGVLACIHAL GADLARAALS LASLKPPVGR GERTALRIGD GEAFLVDESY NANPASIRAA
LATLAGIDTG AKGRRIAVLG DMKELGAAGE ALHRELADAV AANGIDLVFA VGPLMAHLFE
ALPMTVRGTA APTAEGVTDA VLATLRPGDA VMVKGSNSMR MVRIVEAVKA RYAVAPDPRE
ASLNAVR
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