| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4582 |
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| Symbol | |
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| ID | 5835114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 5117029 |
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| End bp | 5119998 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370376 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001642021 |
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| Protein GI | 163853978 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.656955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG GCCCCGAACC GCACGGCAAC AAGATCGAAC AGCCCGAGAT CCGCGCCGAC
GAACGTCAGG ATGCCGGCGG GCCGGCAAAT GGCGCACCAT CGACCTCCGG CGGCGCCTAC
TCTCAGGGCG CCAAGTCGGG TGGCCAGGCC GCGCCCGATC CTTCGGGCAC CTACGGCATC
AAGGACGCCC CGGTCGCGCC CGCGACCATC GCCTTCGAGT TCGATGGCCA ACAGGTCGAG
GCCCAGCCCG GCGAGACGAT TTGGGCGGTT GCCAAGCGCC TCGGCACGCA TATCCCGCAT
CTCTGCCACA AGCCCGATCC CGGCTACCGC CCGGACGGCA ATTGCCGCGC CTGCATGGTC
GAGATCGAGG GCGAGCGCGT GCTTGCCGCC TCGTGCAAGC GCACGCCCGC CATCGGCATG
AAGGTGAAGT CGGCCACCGA GCGCGCCACC AAGGCCCGCG CCATGGTGCT CGAACTGCTC
GTGGCCGATC AGCCCGAGCG CGCAACCTCG CATGACCCGT CGTCGCATTT CTGGGTGCAG
GCCGACGTTC TCGACGTGAC CGAGAGCCGC TTCCCGGCGG CCGAGCGCTG GACCAGCGAC
GTCAGCCACC CGGCGATGAG CGTCAATCTC GACGCCTGCA TCCAGTGCAA TCTGTGTGTG
CGCGCCTGCC GCGAGGTTCA GGTCAACGAC GTGATCGGCA TGGCCTACCG CGCCGCGGGC
TCCAAGGTCG TGTTCGACTT CGACGATCCG ATGGGTGGCT CCACCTGCGT CGCCTGCGGT
GAGTGCGTCC AGGCCTGCCC GACCGGCGCG CTGATGCCGG CCGCCTATCT CGACGCCAAC
CAGACCCGGA CGGTCTATCC CGACCGCGAG GTGAAGTCGC TCTGCCCCTA TTGCGGCGTC
GGCTGCCAAG TCTCCTACAA GGTCAAGGAC GAGCGCATCG TCTACGCCGA GGGCGTGAAC
GGACCGGCCA ACCAGAACCG GCTCTGCGTG AAGGGCCGCT TCGGCTTCGA CTACGTCCAC
CACCCCCACC GCCTGACGGT GCCGCTGATC CGCCTGGAGA ACGTGCCCAA GGACGCCAAC
GATCAGGTCG ATCCGGCGAA CCCCTGGACG CATTTCCGCG AGGCGACCTG GGACGAGGCG
CTCGACCGCG CGGCGGGCGG CCTGAAGGCG ATCCGTGACA CCAACGGGCG CAAGGCGCTG
GCGGGCTTCG GCTCGGCCAA GGGTTCGAAC GAGGAGGCCT ACCTCTTCCA GAAGCTCGTC
CGCCTCGGCT TCGGCACCAA CAACGTCGAT CACTGCACGC GCCTGTGCCA CGCCTCGTCG
GTCGCTGCGC TGATGGAGGG CTTGAATTCC GGCGCCGTCA CCGCCCCCTT CTCGGCAGCG
CTCGACGCCG AGGTCATCGT CGTCATCGGC GCCAACCCGA CCGTGAACCA TCCGGTCGCG
GCGACCTTCC TCAAGAACGC GGTGAAGCAG CGCGGCGCCA AGCTGATCAT CATGGACCCG
CGGCGCCAGA CGCTCTCGCG CCACGCCTAT CGGCACCTCG CCTTCCGCCC CGGCTCGGAC
GTGGCGATGC TCAACGCGAT GCTCAACGTG ATCGTCACGG AGGGCCTCTA CGACGAGCAG
TACATCGCCG GCTACACCGA GAACTTCGAG GCTCTGCGCG AGAAGATCGT CGACTTCACG
CCGGAGAAGA TGGCTTCGGT CTGCGGCATC GATGCCGAGA CCCTGCGTGA GGTCGCCCGG
CTCTATGCCC GGGCCAAGTC GTCGCTCATC TTCTGGGGCA TGGGCGTCAG CCAGCACGTC
CACGGCACCG ACAACTCGCG CTGCCTGATC GCGCTCGCCC TCATCACCGG CCAGATCGGC
CGGCCCGGCA CCGGCCTGCA CCCGTTGCGC GGCCAGAACA ACGTCCAGGG CGCGTCCGAT
GCCGGCCTGA TCCCGATGGT CTACCCGGAC TATCAGTCGG TCGAGAAGGA TGCGGTGCGC
GAGCTGTTCG AGGAGTTCTG GGGTCAGTCC CTCGATCCGC AGAAGGGCCT CACCGTGGTC
GAGATCATGC GCGCGATCCA CGCGGGCGAG ATCCGGGGCA TGTTCGTCGA GGGCGAGAAC
CCGGCGATGT CCGACCCCGA CCTCAACCAC GCCCGCCACG CGCTGGCGAT GCTCGACCAT
CTCGTGGTGC AGGACCTGTT CCTGACGGAG ACGGCCTTCC ACGCCGACGT GGTGCTGCCG
GCCTCGGCCT TTGCCGAGAA GGCCGGGACC TTCACCAACA CCGACCGGCG TGTGCAGATC
GCCCAGCCCG TCGTCGCCCC TCCGGGCGAT GCGCGCCAGG ATTGGTGGAT CATCCAGGAA
CTGGCCCGAC GCCTCGACCT CGACTGGAAC TACGGCGGCC CGGCCGACAT CTTCGCCGAG
ATGGCGCAGG TGATGCCGTC CTTGAACAAC ATCACCTGGG AGCGGCTGGA GCGCGAGGGG
GCGGTGACCT ATCCGGTCGA TGCTCCGGAC CAGCCCGGCA ACGAGATCAT CTTCTATGCC
GGCTTCCCGA CCGAGAGCGG GCGCGCCAAG ATCGTGCCCG CGGCGATCGT GCCGCCGGAC
GAGGTGCCGG ACGACGAGTT CCCGATGGTG CTCTCGACCG GCCGCGTGCT CGAACACTGG
CACACGGGCT CGATGACCCG GCGCGCGGGC GTGCTCGACG CGCTGGAGCC GGAGGCGGTG
GCCTTCATGG CACCCAAGGA GCTCTACCGG CTCGGTCTCC GGCCCGGCGG GTCGATGCGG
TTGGAAACAC GGCGCGGCGC CGTCGTGTTG AAGGTGCGCT CCGACCGGGA CGTGCCGATC
GGCATGATCT TCATGCCCTT CTGCTACGCG GAAGCCGCCG CCAACCTTCT GACCAACCCC
GCCCTCGACC CCCTTGGAAA GATTCCCGAG TTCAAATTCT GCGCAGCCCG CGTCGTCCCC
GCGGAGGCTG CGCCGATGGC CGCCGAGTAA
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| Protein sequence | MSNGPEPHGN KIEQPEIRAD ERQDAGGPAN GAPSTSGGAY SQGAKSGGQA APDPSGTYGI
KDAPVAPATI AFEFDGQQVE AQPGETIWAV AKRLGTHIPH LCHKPDPGYR PDGNCRACMV
EIEGERVLAA SCKRTPAIGM KVKSATERAT KARAMVLELL VADQPERATS HDPSSHFWVQ
ADVLDVTESR FPAAERWTSD VSHPAMSVNL DACIQCNLCV RACREVQVND VIGMAYRAAG
SKVVFDFDDP MGGSTCVACG ECVQACPTGA LMPAAYLDAN QTRTVYPDRE VKSLCPYCGV
GCQVSYKVKD ERIVYAEGVN GPANQNRLCV KGRFGFDYVH HPHRLTVPLI RLENVPKDAN
DQVDPANPWT HFREATWDEA LDRAAGGLKA IRDTNGRKAL AGFGSAKGSN EEAYLFQKLV
RLGFGTNNVD HCTRLCHASS VAALMEGLNS GAVTAPFSAA LDAEVIVVIG ANPTVNHPVA
ATFLKNAVKQ RGAKLIIMDP RRQTLSRHAY RHLAFRPGSD VAMLNAMLNV IVTEGLYDEQ
YIAGYTENFE ALREKIVDFT PEKMASVCGI DAETLREVAR LYARAKSSLI FWGMGVSQHV
HGTDNSRCLI ALALITGQIG RPGTGLHPLR GQNNVQGASD AGLIPMVYPD YQSVEKDAVR
ELFEEFWGQS LDPQKGLTVV EIMRAIHAGE IRGMFVEGEN PAMSDPDLNH ARHALAMLDH
LVVQDLFLTE TAFHADVVLP ASAFAEKAGT FTNTDRRVQI AQPVVAPPGD ARQDWWIIQE
LARRLDLDWN YGGPADIFAE MAQVMPSLNN ITWERLEREG AVTYPVDAPD QPGNEIIFYA
GFPTESGRAK IVPAAIVPPD EVPDDEFPMV LSTGRVLEHW HTGSMTRRAG VLDALEPEAV
AFMAPKELYR LGLRPGGSMR LETRRGAVVL KVRSDRDVPI GMIFMPFCYA EAAANLLTNP
ALDPLGKIPE FKFCAARVVP AEAAPMAAE
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