Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4578 |
Symbol | |
ID | 5835110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5112413 |
End bp | 5113438 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641370372 |
Product | patatin |
Protein accession | YP_001642017 |
Protein GI | 163853974 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.248234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAG TCTCCCAACC GCGCGACACC GCCATCGTGT TCGGCGGCGG CAACGCGCTC GGTGCCTATC ATGCGGGCGC CTTCGAGGTT CTGCAGGCCC GTGGCATCCG GCTGGACCGA TTGGTGGGCG CCTCGATGGG GGCCGTCACC GGGGCGATCA TCGCCGGCAA CGCGCCGGAG GATCGGATCG AGCGGCTTCA CCGGTTCTGG AACGAGGCGA CCCTGCATAC CGGCCTCTCC GGAACCGATT TCCTGAAGCC GCGGCAGTAC TACAATGCCC TCCACTCGCT CCTGACGCTG GCCTGGGGGC GGCCCAGCAT CTTCACGCAC CGCTATCCCG GCCTGTGGTC GGCCCTGCCC TGGGTGCCCA ACGACGTCGC CCTGTTCGAT CATAGGCCCC TGCGCGCCAC GCTCGAGCGT CTGGTCGATT TCGAACGCCT GAACCGGGCC GAGATCCGGC TCACTATCGC TTGCATCGAC GTGGCGACCG GCGAGGAGGT GTTCTTCGAC AACACCCGCC AGACGATCCA GCCCGAGCAC ATCCTGGCCA GCGCCGCCCT GCTGCCGGCC TTTCCGCCGG TCGAGATCGA CGGGCGGATG CTGTGCGATG CCGGCTACAC CAACAACCTC CCCCTCGATC CGCTGTTCGA GCCCGAGCCG ACCCGCGACC TGCTCTGCAT CGCCCTCGAC CTGTTCTCGC TGCGGGCCGA TCGGCCCCGC TCGCTCGACG CCGTGCTGGA ACGGGCCAAC GATCTCATCT TCGCCAGCGC CGCCCGGCGC GCGGTGACGG GACTGGCGCG CAGCTACGCC CTGCGCGAGC GGCTCGATCC GGACGGTCCC GCCGCGACGC TCTTGCACAT CGTCCATCAG GCCGGCGCGG ACCAGCTCGC GTCCAAGAGC TTCGACTTCT CGCCCTCCTC GATCCGCGAT CGCTGGGAGG CGGGTGCCCG CGACATGGAG CGGGGTCTCG ACCGCCTGGC CGAGCTGCCG ACTTCCGGCG GGCGCTTCCA CTACGAGTGC CCGTGA
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Protein sequence | MQTVSQPRDT AIVFGGGNAL GAYHAGAFEV LQARGIRLDR LVGASMGAVT GAIIAGNAPE DRIERLHRFW NEATLHTGLS GTDFLKPRQY YNALHSLLTL AWGRPSIFTH RYPGLWSALP WVPNDVALFD HRPLRATLER LVDFERLNRA EIRLTIACID VATGEEVFFD NTRQTIQPEH ILASAALLPA FPPVEIDGRM LCDAGYTNNL PLDPLFEPEP TRDLLCIALD LFSLRADRPR SLDAVLERAN DLIFASAARR AVTGLARSYA LRERLDPDGP AATLLHIVHQ AGADQLASKS FDFSPSSIRD RWEAGARDME RGLDRLAELP TSGGRFHYEC P
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