| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4562 |
|---|
| Symbol | |
|---|
| ID | 5835574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5094932 |
|---|
| End bp | 5096230 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641370356 |
|---|
| Product | nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_001642001 |
|---|
| Protein GI | 163853958 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.021535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.183994 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC TCGCGAAGCG GGTCTACGAC CACAACTTCC GCATCGACCC GATCGTGCGC
TCGCTGCTCG ATACGGATTT CTACAAGCTC TTGATGGCGC AGATGATCTT CCGCCGTCAC
CGCGACCTGC GCGTCAGCTT CGGAATCCAG AACCGCACCC GGAGCGTGCG GGTCGCCGAC
GAGATCGACC TCGGGGAATT GCGGGCGCAG CTCGACCACG CCCGCACGAT CCGCCTGAGC
CGGGGTGAAT CGACCTGGCT TCGCGGCAAC ACTTTCTACG GCAAGCGTCA GATCCTCTCC
TCCGAGTTCA TGGCCTGGCT CGAAGCGTTT CGCCTGCCGG AATACGAGCT GGAGGTGCGT
GACGGACAGG TGGCGCTGAC CTTCCATGGC CCGTGGGTCG AGACCACGAT GTGGGAGGTA
CCGGCTCTCG CAATCCTCAA CGAGATGCGC TCCCGCGCGG TGCTGCGGGG CCTCGGCAAA
TTCGAGCTGC AGGTGCTCTA CGCCCGCGCC ATGACCCGCG TCTGGGAGAA GATCGAGCGC
CTGAAGCGCC TGCCCGACCT CTCCATCGCC GATTTCGGCA CGCGCCGCCG CCACGGCTTC
CTGTGGCAGG ATTGGTGCGT GCAGGCGATG AGCGAGGGCC TCGGCGAGCG GGCCTTCCTC
GGCACCTCGA ACTGCCTGAT CGCCATGCGC CGCGAGGTCG AGGCGGTGGG TACCAACGCC
CACGAACTGC CGATGGTCTA CGCCGCGCTC GCCGGAGACG ACGATGAGGC GCTGGCGGCC
GCGCCCTACG CGGTGCTGGC CGACTGGCAG CAGGACTATG CCGGTAACCT GCTCGTGGCC
TTGCCCGACA CCTACGGCAC CACCGGCTTT CTCGCGAAGG CGCCGGACTG GCTCACGGCC
TGGACCGGCA TCCGCATCGA CTCGAAGGAG CCGATCGCGG GCGGCGAGGA GGCGCTCGCC
TTCTGGGAGT CGCGAGGCTG CGATCCGCGT GAAAAGCTGG CGATCTTCTC CGACGGACTC
GACGTCGACG ACATCGAGGC GATCCACGCC CATTTCCACG GCCGCATGCG CATTGGCTAC
GGCTGGGGCA CCCGCCTGAC CAACGATTTT CGCGGCCTCG TGCCGGAGGG GCGGCTCGAT
CCGATCTCTG TCGTCTGCAA GGTGACGGAG GCCGAGGGCC GCCCGACGGT GAAGATTTCC
GACAATCCGA GCAAGGCGCA GGGGCCGGCA GCCGAGGTTG AGCGCTACAA GCGGGTGTTC
GGGGTCGAGG AGCAGGCCGC GATGGCGGTC GCGGTGTGA
|
|---|
| Protein sequence | MIDLAKRVYD HNFRIDPIVR SLLDTDFYKL LMAQMIFRRH RDLRVSFGIQ NRTRSVRVAD
EIDLGELRAQ LDHARTIRLS RGESTWLRGN TFYGKRQILS SEFMAWLEAF RLPEYELEVR
DGQVALTFHG PWVETTMWEV PALAILNEMR SRAVLRGLGK FELQVLYARA MTRVWEKIER
LKRLPDLSIA DFGTRRRHGF LWQDWCVQAM SEGLGERAFL GTSNCLIAMR REVEAVGTNA
HELPMVYAAL AGDDDEALAA APYAVLADWQ QDYAGNLLVA LPDTYGTTGF LAKAPDWLTA
WTGIRIDSKE PIAGGEEALA FWESRGCDPR EKLAIFSDGL DVDDIEAIHA HFHGRMRIGY
GWGTRLTNDF RGLVPEGRLD PISVVCKVTE AEGRPTVKIS DNPSKAQGPA AEVERYKRVF
GVEEQAAMAV AV
|
|---|
| |