| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4542 |
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| Symbol | |
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| ID | 5832113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 5073567 |
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| End bp | 5076857 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370336 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001641981 |
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| Protein GI | 163853938 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.220973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0899725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGC GTATTCGTGC CTACGATTGG GCACGGACAC CTCTTGGCGC CATTGGTGAT
TGGCCGCAGA GTTTGAGGAC GATGGTCGAG TTGATGCTCG GCTCTCCTTT GCCGGCCGCG
ATCGCCTGGG GTCCTGAACT TACGGTAATC TATAACGACG GTTTCGACGC GATCGACAAC
TTCAGCGATC CGCCGCCCCT TGGCCGCCCG TTCACGAAAG TCTGGCCAAA GCCGGAAAGC
GACGGGATCG TCGACTCGAT ACGACAGGGG CAGGCCCGTC AGATCATTGA TCGCTACTGG
GATCTTCCCG CGCGGCCGGA GCGACCCTTC GGCTGGTTCA CGTCCCAGTG GACGCCGTTG
CGGGACGAAG CGGGAGGCTT CGCCGGGTTC TATCTCGCCG CCTTCGAGAC GACCGATCGC
GTCCTCGTCG AGCGGGCCTT GCTCGAGCGC GAGGAGCAGC AGGCCTTCGT GCTCGGCCTC
AGCGACGCGC TGCGCCCCCT GGCCGATCCG CTCGAAGTCC AGGCCGTGGC CTGCCGCTTG
CTCGGCGAGC ACCTTCAGGC GGACTACACG TACTACCTCA ACCTGTACGA GGCGGAGGGT
TTCGCGATCA TCGCACAGGA TTTCGCGCGC GCGGGTCTCC CCTCGCGAGC CGGGAAATAT
CCCCTCAGCC TCGTCGGTTG GGCGATGCCC CATCAGGGCC AGGGCCAGCC GATCGCGATC
ACGGACGTGC AGACATCCCC CCTGGTCCCG GACGACTGCC GGGAGAGGGT GCTGGCCGAC
CGTGTCGTGA GCCTGCTCGG CATTCCGCTG GCGAAGCAGG GCCGCCTCGT CGGCGCACTT
GCGCTCTCCA TGACGACGCC GCGAGAATGG ACCCCTGCGG AGATCGCGCT GGCCACCGAG
ATCGGCGAGC GCACCTGGGC GGCGATGGAG CGGGCCCGCG CGGAGAAGAC GGCGCGCGAG
GCCGACATTC GCCTGCGCAC CCTGGCCGAT GCCGCGCCCG TCCTGATCTG GGACGCGGAT
TCGAGCGGCA CGATCCTCGT CAACGACCAC TATCTCGACT TCTTCGGTGT CGGCTTCGAG
GCCGTGGCGG GGTATGGCTG GCAGAAGTTC CTGCATCCCG AGGATGCCGA GCGACACCTT
TCTCTCTTCC AAGAGGCGTT CGCGCAGCGC CATTGCTTCA CCGACGAGGC CCGGCTCCGC
CGTGCCGACG GGCAGTACCG CTGGCTCAGC ACGTCCGGCC GGCCGCTGGA GGACGGGCGC
TTCGTCGGCG TCTCGATCGA CGTCACCGAG CGGCGCCTCG CCGAGCAGCG CGTCAGGCGC
AACAATGCCG TCCTCCAAGC GATCAACCTC GTCTTCAGCG AGACGCTCGG CGCCTCCTCG
GAGGAGGAAT TGGCGCGCAT CTCCCTCGAA GTCGCCGAAG AGCTGACCGG CAGCGCCATC
GGCTTCATCG GTGAGATCAA TGAGACCACC GGGCGCCTCG ACGGCCTGTT CTTCAGCGAC
CGGAGCCGGG CCCGCTACGC CGCGCACGCA TCGGAGGGGG ATGACAGCTT CCCGATGGGC
AAGTCGGCGC TGGGGCTTGC GATTCACGGC ATCTACGGGC GGGTGTTGCA GGATGGCGCG
GGCGTCATCG TCAACGATCC CGCCTCCCAC CCCGACCGCA TCGGCACGCC GGCCGGCCAC
CTGCCGCTGA CGGCCTTCCT CGGCGTGCCG CTGAAGCAGG GTGACAGGAC GCGGGGTCTG
ATCGGGCTCG GCAACCGCCC GGGCGGCTAC CGGCCGGAGG ACCTTGAGGC GGCGGAGGCG
CTGGCGCCCG CGATCTGGCA CGCCTTGCGC AGCAAGCGGG CGGAGCTGCG CCTGCGCGAG
AGCGAGGAGC GTTTCCGGCA ATTCGCCGAG GCTTCCTCCG ACGTCCTCTG GATCCGCGAT
GCGGAGACGT TCGAGATGGA GTTCGTCAGC CCGGCGCTGC GGACGGTCTA CGGCATCGAG
CCCAACGTGC TCGGCCCCGA GATCCGGCGG TGGGCCGGCC ACATGCTGCC GGAGGATCGC
GAGAACGCCC TGCAGAATCT GCAGCGGGCG GCGACCGGCC AATCGCTGCT GAACGAGTTC
CGCATCAAGC GGCCGAGCGA CGGCGCCTTC CGCTGGATCC GCAGCACGCT GTTTCCCCTG
CGCGACGAGC AGGGCCGGGT GCGGCGCATC GGCGGTCTGT CCTCCGACAT GACCGAGGCC
AAGCTGCTGA TCGGGCATCA GGCCGTGCTG CTCGCCGAAT TGCAGCACAG GGTGCGCAAC
ATCATGGCGG TGACCCGCTC GATCGTCGCC CGCACGGGCG AGCGGGCGGA GACCGTGTCC
GATTACGCGT CCCTGGTGGG AGGGCGCCTC CTGACGCTGG CCCGCGTCCA GGCCCTGCTG
ACCCGCTCGC CCAATGCCGG CGTGCCGGTC GCCACCATCG TCCGCGACGA GATCGACGCC
CAGGACCTGC GCGCGGACCA ATACGATCTG TCCGGACCCA AAATCGAACT CTCGCCCAAG
GCGGCGGAGA TCCTGACGCT CGCCGTTCAC GAACTGGCGA CCAATGCCCT GAAATATGGA
GCCTTGTCGG TGCCGGATGG GCGCGTGCGG GTGAATTGGT CCTCGTTCGA GAAGAGAGGC
GAGCCCTGGC TCGGCTTCGA TTGGGCAGAG GATGGTGTGC CGGAAGCGAA GATTGCGGGC
GAGCGTGAGG CGAATCGTCG CACCGGCGCG CGCCGTGGTT TCGGCCGCGA ACTGATCGAG
GTGCGCCTGC CTTACGAACT CGGGGGGCGC GGTCGCCTGG AGATCGGTCC GGAGGGGGCG
CGGTGCCGCC TCGAATTTCC GCTCCGTGAC GGCGCCAGCA TTCTTGAAAC CGATGCCCCG
CAACGAGCGA CCGTGTTCGG AGGAGCGCTC GACATGACCG GCGAACCAGA TTTGAGCGGC
TATCGTATCC TCGTGGTGGA GGACGATTAC TATCTCGCCA CCGATACGGC ACGCGCGCTC
CAGGGAGCGG GCGCGGAGGT GGTTGGCCCC TGCTCCAGCG AGGAGGCGGC GCGCGAGGCG
CTCGATGAAG GGGCGCTGGC AGCGGCGCTG GTGGATATCA ATCTCGGATC AGGGCCGTCC
TTCACCCTGG CGGCCCTGCT TCGGGAGCGC GGCGTGCCGT TCGTGTTCAT CACCGGTTAC
GACGAGGGGG TGATTCCGCC GGATTTCGCC GATGTCGAGC GTCTCCAGAA GCCCGTCGAG
CTGAAACGCG TCGTCAATTT CCTCGCCGAC ACGCTGCAGG CGGCGCAGTG A
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| Protein sequence | MSARIRAYDW ARTPLGAIGD WPQSLRTMVE LMLGSPLPAA IAWGPELTVI YNDGFDAIDN
FSDPPPLGRP FTKVWPKPES DGIVDSIRQG QARQIIDRYW DLPARPERPF GWFTSQWTPL
RDEAGGFAGF YLAAFETTDR VLVERALLER EEQQAFVLGL SDALRPLADP LEVQAVACRL
LGEHLQADYT YYLNLYEAEG FAIIAQDFAR AGLPSRAGKY PLSLVGWAMP HQGQGQPIAI
TDVQTSPLVP DDCRERVLAD RVVSLLGIPL AKQGRLVGAL ALSMTTPREW TPAEIALATE
IGERTWAAME RARAEKTARE ADIRLRTLAD AAPVLIWDAD SSGTILVNDH YLDFFGVGFE
AVAGYGWQKF LHPEDAERHL SLFQEAFAQR HCFTDEARLR RADGQYRWLS TSGRPLEDGR
FVGVSIDVTE RRLAEQRVRR NNAVLQAINL VFSETLGASS EEELARISLE VAEELTGSAI
GFIGEINETT GRLDGLFFSD RSRARYAAHA SEGDDSFPMG KSALGLAIHG IYGRVLQDGA
GVIVNDPASH PDRIGTPAGH LPLTAFLGVP LKQGDRTRGL IGLGNRPGGY RPEDLEAAEA
LAPAIWHALR SKRAELRLRE SEERFRQFAE ASSDVLWIRD AETFEMEFVS PALRTVYGIE
PNVLGPEIRR WAGHMLPEDR ENALQNLQRA ATGQSLLNEF RIKRPSDGAF RWIRSTLFPL
RDEQGRVRRI GGLSSDMTEA KLLIGHQAVL LAELQHRVRN IMAVTRSIVA RTGERAETVS
DYASLVGGRL LTLARVQALL TRSPNAGVPV ATIVRDEIDA QDLRADQYDL SGPKIELSPK
AAEILTLAVH ELATNALKYG ALSVPDGRVR VNWSSFEKRG EPWLGFDWAE DGVPEAKIAG
EREANRRTGA RRGFGRELIE VRLPYELGGR GRLEIGPEGA RCRLEFPLRD GASILETDAP
QRATVFGGAL DMTGEPDLSG YRILVVEDDY YLATDTARAL QGAGAEVVGP CSSEEAAREA
LDEGALAAAL VDINLGSGPS FTLAALLRER GVPFVFITGY DEGVIPPDFA DVERLQKPVE
LKRVVNFLAD TLQAAQ
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