| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4514 |
|---|
| Symbol | |
|---|
| ID | 5834444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5039654 |
|---|
| End bp | 5040385 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641370307 |
|---|
| Product | autoinducer-binding domain-containing protein |
|---|
| Protein accession | YP_001641953 |
|---|
| Protein GI | 163853910 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.447162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAA AATCACTTGA CCTGACGTTG GAAATTCTGA AGTCGCTCGA TCGAGCGCAT
TCGCGTGAGG ATATCCTGCG GGCCATCATG CCGCGGCTCA ACGCGCTGGG CATCGAATAC
GTCATCTCGG CCATGATTCC TCTGAAACGC CTGCCGGCGC GAACACAGAA GAATTATCTT
ATTTTAGAGA ATACTTCCGA CGAGTGGAAC CGGCTCTACT TTTCGAAAGG CTATATGTAT
ACGGACCCGG TCGTGCAGGC GACCCTGTCC AGCACGACCG GCTTCCGCTG GTCGGAGATC
GAACCGGCGG GCGTGCTCGA TCCCCGCTCG CGGCAGGTGA TGAACGAGGC CGGCGAGTTC
GGCCTCGGCG ACGGCTTTAC GGTGCCGCTC GCCACGCTGG AGGAGGAGCG CGGCGGCCTC
ACCTTCGCGG GTCCGCAGCT CGATATCAGC CCAGGACAGC GCGGGATGCT CACCCTGCTC
GCCTCCTACG TGGTCGGGCA GACGCTGCTG ATCGACAACG GCCCCAGCGA ACGCCGGATG
GGACTGACCC CGCGCGAGCG CGAGAGCCTG CAATGGGTCG CCGAGGGCAA GACCGATTGG
GAAATCGGTG AGCTGATGGG CATCTCGCGG CACGGTGTCG ATTTCCACCT GCGCTCCGCC
CGGGTGAAAC TCGGCTGCGT GTCCCGGACG CAAGCGGTGG CCGAAGGGTT CAGGCGCGGC
CTGATCATCT GA
|
|---|
| Protein sequence | MSRKSLDLTL EILKSLDRAH SREDILRAIM PRLNALGIEY VISAMIPLKR LPARTQKNYL
ILENTSDEWN RLYFSKGYMY TDPVVQATLS STTGFRWSEI EPAGVLDPRS RQVMNEAGEF
GLGDGFTVPL ATLEEERGGL TFAGPQLDIS PGQRGMLTLL ASYVVGQTLL IDNGPSERRM
GLTPRERESL QWVAEGKTDW EIGELMGISR HGVDFHLRSA RVKLGCVSRT QAVAEGFRRG
LII
|
|---|
| |